RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 ALDH18A1P54886 795 aaKnown RBP21.35■■□□□ 1.01
HOXA4-201ENST00000360046 SIM2Q14190 667 aaPredicted RBP21.35■■□□□ 1.01
HOXA4-201ENST00000360046 FBXO48Q5FWF7 155 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 MBOAT1Q6ZNC8 495 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 PRR23BQ6ZRT6 265 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 LRRC34Q8IZ02 419 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 ZNF317Q96PQ6 595 aaPredicted RBP21.35■■□□□ 1.01
HOXA4-201ENST00000360046 RABEP2Q9H5N1 569 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 TRNAU1APQ9NX07 287 aaKnown RBP21.35■■□□□ 1.01
HOXA4-201ENST00000360046 ST14Q9Y5Y6 855 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 USP34Q70CQ2 3546 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 GALR2O43603 387 aaPredicted RBP21.35■■□□□ 1.01
HOXA4-201ENST00000360046 KLK8O60259 260 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 SIX3O95343 332 aaPredicted RBP21.35■■□□□ 1.01
HOXA4-201ENST00000360046 IMPDH1P20839 514 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 AK4P27144 223 aaPredicted RBP21.35■■□□□ 1.01
HOXA4-201ENST00000360046 ACADLP28330 430 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 AFF3P51826 1226 aaKnown RBP21.35■■□□□ 1.01
HOXA4-201ENST00000360046 HERVK_113P63132 956 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 SLC30A9Q6PML9 568 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 PDPRQ8NCN5 879 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 ZBTB44Q8NCP5 570 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 RMDN2Q96LZ7 410 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 ERVK-6Q9BXR3 956 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 ZDHHC5Q9C0B5 715 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 EPN3Q9H201 632 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 TCEAL2Q9H3H9 227 aaPredicted RBP21.35■■□□□ 1.01
HOXA4-201ENST00000360046 FGFR1OP2Q9NVK5 253 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 DNAJC28Q9NX36 388 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 ASF1AQ9Y294 204 aa21.35■■□□□ 1.01
HOXA4-201ENST00000360046 CFAP20Q9Y6A4 193 aaKnown RBP21.35■■□□□ 1.01
HOXA4-201ENST00000360046 KMT2EQ8IZD2 1858 aa21.34■■□□□ 1.01
HOXA4-201ENST00000360046 KRT87PA6NCN2 255 aa21.34■■□□□ 1.01
HOXA4-201ENST00000360046 ANXA5P08758 320 aa21.34■■□□□ 1.01
HOXA4-201ENST00000360046 EEF1DP29692 281 aaKnown RBP21.34■■□□□ 1.01
HOXA4-201ENST00000360046 ACTR1BP42025 376 aa21.34■■□□□ 1.01
HOXA4-201ENST00000360046 SLC1A6P48664 564 aa21.34■■□□□ 1.01
HOXA4-201ENST00000360046 CSNK1EP49674 416 aaKnown RBP21.34■■□□□ 1.01
HOXA4-201ENST00000360046 ACTR1AP61163 376 aa21.34■■□□□ 1.01
HOXA4-201ENST00000360046 ILF3Q12906 894 aaKnown RBP eCLIP21.34■■□□□ 1.01
HOXA4-201ENST00000360046 SETDB1Q15047 1291 aa21.34■■□□□ 1.01
HOXA4-201ENST00000360046 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.34■■□□□ 1.01
HOXA4-201ENST00000360046 RASGRP3Q8IV61 690 aa21.34■■□□□ 1.01
HOXA4-201ENST00000360046 PHACTR4Q8IZ21 702 aa21.34■■□□□ 1.01
HOXA4-201ENST00000360046 CCL4L1Q8NHW4 92 aa21.34■■□□□ 1.01
HOXA4-201ENST00000360046 L3HYPDHQ96EM0 354 aa21.34■■□□□ 1.01
HOXA4-201ENST00000360046 CAAP1Q9H8G2 361 aa21.34■■□□□ 1.01
HOXA4-201ENST00000360046 ZNF395Q9H8N7 513 aaPredicted RBP21.34■■□□□ 1.01
HOXA4-201ENST00000360046 WWOXQ9NZC7 414 aa21.34■■□□□ 1.01
HOXA4-201ENST00000360046 KLF15Q9UIH9 416 aa21.34■■□□□ 1.01
HOXA4-201ENST00000360046 WDR37Q9Y2I8 494 aa21.34■■□□□ 1.01
HOXA4-201ENST00000360046 FANCMQ8IYD8 2048 aa21.34■■□□□ 1.01
HOXA4-201ENST00000360046 WDFY4Q6ZS81 3184 aa21.34■■□□□ 1.01
HOXA4-201ENST00000360046 TDRD6O60522 2096 aaKnown RBP21.33■■□□□ 1.01
HOXA4-201ENST00000360046 LRRC14BA6NHZ5 514 aa21.33■■□□□ 1.01
HOXA4-201ENST00000360046 PRR19A6NJB7 356 aa21.33■■□□□ 1.01
HOXA4-201ENST00000360046 TMEM114B3SHH9 223 aa21.33■■□□□ 1.01
HOXA4-201ENST00000360046 STX16-NPEPL1H3BU86 382 aa21.33■■□□□ 1.01
HOXA4-201ENST00000360046 STX16O14662 325 aa21.33■■□□□ 1.01
HOXA4-201ENST00000360046 LYPLA1O75608 230 aaPredicted RBP21.33■■□□□ 1.01
HOXA4-201ENST00000360046 SUPT7LO94864 414 aa21.33■■□□□ 1.01
HOXA4-201ENST00000360046 AGTR2P50052 363 aa21.33■■□□□ 1.01
HOXA4-201ENST00000360046 BLKP51451 505 aa21.33■■□□□ 1.01
HOXA4-201ENST00000360046 AP1S2P56377 157 aa21.33■■□□□ 1.01
HOXA4-201ENST00000360046 C21orf59P57076 290 aa21.33■■□□□ 1.01
HOXA4-201ENST00000360046 ZNF678Q5SXM1 525 aa21.33■■□□□ 1.01
HOXA4-201ENST00000360046 UNC5DQ6UXZ4 953 aa21.33■■□□□ 1.01
HOXA4-201ENST00000360046 SPATS2Q86XZ4 545 aaKnown RBP21.33■■□□□ 1.01
HOXA4-201ENST00000360046 OR6Y1Q8NGX8 325 aa21.33■■□□□ 1.01
HOXA4-201ENST00000360046 TFGQ92734 400 aaPredicted RBP21.33■■□□□ 1.01
HOXA4-201ENST00000360046 SKA1Q96BD8 255 aa21.33■■□□□ 1.01
HOXA4-201ENST00000360046 PITPNM3Q9BZ71 974 aa21.33■■□□□ 1.01
HOXA4-201ENST00000360046 PRDM8Q9NQV8 689 aa21.33■■□□□ 1.01
HOXA4-201ENST00000360046 THAP1Q9NVV9 213 aa21.33■■□□□ 1.01
HOXA4-201ENST00000360046 CIDEBQ9UHD4 219 aa21.33■■□□□ 1.01
HOXA4-201ENST00000360046 PCDHGA2Q9Y5H1 932 aa21.33■■□□□ 1.01
HOXA4-201ENST00000360046 TP53BP1Q12888 1972 aaPredicted RBP21.33■■□□□ 1
HOXA4-201ENST00000360046 ITM2AO43736 263 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 C1orf105O95561 183 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 CTSEP14091 401 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 GNSP15586 552 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 JUNDP17535 347 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 ABCE1P61221 599 aaKnown RBP21.32■■□□□ 1
HOXA4-201ENST00000360046 CDKL1Q00532 357 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 RCN2Q14257 317 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 C18orf21Q32NC0 220 aaPredicted RBP21.32■■□□□ 1
HOXA4-201ENST00000360046 SULT1C3Q6IMI6 304 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 RPS27LQ71UM5 84 aaKnown RBP21.32■■□□□ 1
HOXA4-201ENST00000360046 PHC3Q8NDX5 983 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 PPP4R1Q8TF05 950 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 PIGKQ92643 395 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 ESAMQ96AP7 390 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 RHBDF1Q96CC6 855 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 ZC3H10Q96K80 434 aaKnown RBP21.32■■□□□ 1
HOXA4-201ENST00000360046 C12orf66Q96MD2 445 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 APOBEC3BQ9UH17 382 aaKnown RBP21.32■■□□□ 1
HOXA4-201ENST00000360046 TNRC6BQ9UPQ9 1833 aaKnown RBP21.32■■□□□ 1
HOXA4-201ENST00000360046 SRRM3A6NNA2 597 aaPredicted RBP21.32■■□□□ 1
HOXA4-201ENST00000360046 VILLO15195 856 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 SNNO75324 88 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms