RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 SLC24A3Q9HC58 644 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 RXFP3Q9NSD7 469 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 PCMTD2Q9NV79 361 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 NLGN3Q9NZ94 848 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 ZNF624Q9P2J8 865 aaPredicted RBP12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 DCDC2Q9UHG0 476 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 IKZF3Q9UKT9 509 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 RUVBL2Q9Y230 463 aaKnown RBP12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 ACTL7BQ9Y614 415 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 KIR2DS5A0A0G2JLQ3 304 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 A0A0G2JNG1 304 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 KIR2DS3K7RE56 304 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 SLC16A5O15375 505 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 NOBOXO60393 691 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 PSIP1O75475 530 aaKnown RBP12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 GSTA1P08263 222 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 CRHR1P34998 444 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 SLC19A1P41440 591 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 MAPK9P45984 424 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 SLC14A1Q13336 389 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 KIR2DS5Q14953 304 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 SUZ12Q15022 739 aaKnown RBP12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 FAM83EQ2M2I3 478 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 C6orf132Q5T0Z8 1188 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 UNC5DQ6UXZ4 953 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 ISCA2Q86U28 154 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 SFTPA2Q8IWL1 248 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 SRRM1Q8IYB3 904 aaKnown RBP12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 SFRP1Q8N474 314 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 BANPQ8N9N5 519 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 GPR156Q8NFN8 814 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 OR4C6Q8NH72 309 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 DLG3Q92796 817 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 C12orf66Q96MD2 445 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 FOPNLQ96NB1 174 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 DUSP23Q9BVJ7 150 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 SLC12A9Q9BXP2 914 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 TFB2MQ9H5Q4 396 aaKnown RBP12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 ZNF358Q9NW07 568 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 NOVA2Q9UNW9 492 aaKnown RBP12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 HEBP2Q9Y5Z4 205 aa12.1□□□□□ -0.47
NIF3L1-201ENST00000359683 TRBV23OR9-2A0A075B6M9 112 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 CCDC189A1A4V9 331 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 OR52A4PA6NMU1 304 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 CDC7O00311 574 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 TRIM38O00635 465 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 SLC30A4O14863 429 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 FFAR2O15552 330 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 ZBTB14O43829 449 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 SYF2O95926 243 aaKnown RBP12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 C8GP07360 202 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 ALPPL2P10696 532 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 MTHFD1P11586 935 aaKnown RBP12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 CREB1P16220 341 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 CCT5P48643 541 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 UBE2IP63279 158 aaKnown RBP12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 ACAP2Q15057 778 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 TSNAXIP1Q2TAA8 658 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 TBC1D21Q8IYX1 336 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 C4orf33Q8N1A6 199 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 FAM181AQ8N9Y4 354 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 FBXO15Q8NCQ5 510 aaPredicted RBP12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 PHC3Q8NDX5 983 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 CFAP61Q8NHU2 1237 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 SLC37A2Q8TED4 501 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 SKA2Q8WVK7 121 aaPredicted RBP12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 PATE1Q8WXA2 126 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 KIAA1191Q96A73 305 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 ALKBH8Q96BT7 664 aaKnown RBP12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 PTERQ96BW5 349 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 SMC6Q96SB8 1091 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 EDEM2Q9BV94 578 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 MVB12BQ9H7P6 319 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 TMEM9BQ9NQ34 198 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 MKS1Q9NXB0 559 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 CPNE7Q9UBL6 633 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 TSR3Q9UJK0 312 aaKnown RBP12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 ADAMTS6Q9UKP5 1117 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 ASF1AQ9Y294 204 aa12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 CFAP20Q9Y6A4 193 aaKnown RBP12.09□□□□□ -0.47
NIF3L1-201ENST00000359683 B4DGG1 531 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 BTN3A1O00481 513 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 GDF9O60383 454 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 C1orf105O95561 183 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 TOP3BO95985 862 aaKnown RBP12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 TFEBP19484 476 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 KCNC1P48547 511 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 SP140Q13342 867 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 TSNQ15631 228 aaKnown RBP12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 ZCCHC8Q6NZY4 707 aaKnown RBP12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 SBSNQ6UWP8 590 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 CDHR3Q6ZTQ4 885 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 ARL14Q8N4G2 192 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 TMEM151AQ8N4L1 468 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 OR5K2Q8NHB8 316 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 RHEBL1Q8TAI7 183 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 MAPK15Q8TD08 544 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 ZFPM2Q8WW38 1151 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 FERD3LQ96RJ6 166 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 UNKQ9C0B0 810 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms