RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 RGL4Q8IZJ4 473 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 TAGAPQ8N103 731 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 BIRC8Q96P09 236 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 TCF25Q9BQ70 676 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 MUC13Q9H3R2 512 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 PDFQ9HBH1 243 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 USP22Q9UPT9 525 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 MRPS23Q9Y3D9 190 aaKnown RBP10.96□□□□□ -0.65
SSU72-202ENST00000359060 GPR45Q9Y5Y3 372 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 LEFTY2O00292 366 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 FTH1P02794 183 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 PABPC4LP0CB38 370 aaKnown RBP10.96□□□□□ -0.65
SSU72-202ENST00000359060 CSF2RAP15509 400 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 PWP1Q13610 501 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 ATP13A5Q4VNC0 1218 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 FNDC3BQ53EP0 1204 aaKnown RBP10.96□□□□□ -0.65
SSU72-202ENST00000359060 CARD16Q5EG05 197 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 TTC23Q5W5X9 447 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 C22orf39Q6P5X5 142 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 HACD2Q6Y1H2 254 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 P3H2Q8IVL5 708 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 TTC30BQ8N4P2 665 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 NUDT8Q8WV74 236 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 PAIP1Q9H074 479 aaKnown RBP10.96□□□□□ -0.65
SSU72-202ENST00000359060 ZNF334Q9HCZ1 680 aaPredicted RBP10.96□□□□□ -0.65
SSU72-202ENST00000359060 TLR9Q9NR96 1032 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 IKZF3Q9UKT9 509 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 FAM32AQ9Y421 112 aaKnown RBP10.96□□□□□ -0.65
SSU72-202ENST00000359060 C7orf72A4D263 438 aa10.96□□□□□ -0.66
SSU72-202ENST00000359060 CXCR6O00574 342 aa10.96□□□□□ -0.66
SSU72-202ENST00000359060 PRKD3O94806 890 aa10.96□□□□□ -0.66
SSU72-202ENST00000359060 THRBP10828 461 aa10.96□□□□□ -0.66
SSU72-202ENST00000359060 CCL5P13501 91 aa10.96□□□□□ -0.66
SSU72-202ENST00000359060 RPL10P27635 214 aaKnown RBP10.96□□□□□ -0.66
SSU72-202ENST00000359060 CTSOP43234 321 aaPredicted RBP10.96□□□□□ -0.66
SSU72-202ENST00000359060 PDCD4Q53EL6 469 aaKnown RBP10.96□□□□□ -0.66
SSU72-202ENST00000359060 GPRC6AQ5T6X5 926 aa10.96□□□□□ -0.66
SSU72-202ENST00000359060 BEND7Q8N7W2 519 aaPredicted RBP10.96□□□□□ -0.66
SSU72-202ENST00000359060 SORCS1Q8WY21 1168 aa10.96□□□□□ -0.66
SSU72-202ENST00000359060 FATE1Q969F0 183 aa10.96□□□□□ -0.66
SSU72-202ENST00000359060 AP2M1Q96CW1 435 aa10.96□□□□□ -0.66
SSU72-202ENST00000359060 TEX37Q96LM6 180 aa10.96□□□□□ -0.66
SSU72-202ENST00000359060 SCN3BQ9NY72 215 aa10.96□□□□□ -0.66
SSU72-202ENST00000359060 LHX3Q9UBR4 397 aa10.96□□□□□ -0.66
SSU72-202ENST00000359060 PHF24Q9UPV7 400 aa10.96□□□□□ -0.66
SSU72-202ENST00000359060 PRSS21Q9Y6M0 314 aa10.96□□□□□ -0.66
SSU72-202ENST00000359060 FAM92AA1XBS5 289 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 IFRD1O00458 451 aaPredicted RBP10.95□□□□□ -0.66
SSU72-202ENST00000359060 MANBAO00462 879 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 FGF18O76093 207 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 MATN4O95460 622 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 ENO2P09104 434 aaPredicted RBP10.95□□□□□ -0.66
SSU72-202ENST00000359060 CAPGP40121 348 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 MYBPC1Q00872 1141 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 FOXM1Q08050 763 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 SPDYE7PQ495Y7 208 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 ARSIQ5FYB1 569 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 RAET1GQ6H3X3 334 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 CRTC3Q6UUV7 619 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 NECAB2Q7Z6G3 386 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 PARP8Q8N3A8 854 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 AADATQ8N5Z0 425 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 TMBIM1Q969X1 311 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 DTNBP1Q96EV8 351 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 TRIB3Q96RU7 358 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 SLC32A1Q9H598 525 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 ASB1Q9Y576 335 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 WNT6Q9Y6F9 365 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 NPIPB15A6NHN6 443 aaPredicted RBP10.95□□□□□ -0.66
SSU72-202ENST00000359060 SNAP29O95721 258 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 C8BP07358 591 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 ZDHHC11BP0C7U3 371 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 ACRV1P26436 265 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 ALDH9A1P49189 494 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 NUP107P57740 925 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 RPL26P61254 145 aaKnown RBP10.95□□□□□ -0.66
SSU72-202ENST00000359060 DEFB103AP81534 67 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 ACVR1Q04771 509 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 CAMK2GQ13555 558 aaPredicted RBP10.95□□□□□ -0.66
SSU72-202ENST00000359060 SLC14A2Q15849 920 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 ZNF648Q5T619 568 aaPredicted RBP10.95□□□□□ -0.66
SSU72-202ENST00000359060 CLP1Q92989 425 aaKnown RBP10.95□□□□□ -0.66
SSU72-202ENST00000359060 OSGEPL1Q9H4B0 414 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 SNX8Q9Y5X2 465 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 DICER1Q9UPY3 1922 aaKnown RBP10.95□□□□□ -0.66
SSU72-202ENST00000359060 CROCCQ5TZA2 2017 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 KPNA5O15131 536 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 IL6P05231 212 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 HSD17B1P14061 328 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 NR4A1P22736 598 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 CHI3L1P36222 383 aaPredicted RBP10.95□□□□□ -0.66
SSU72-202ENST00000359060 HK3P52790 923 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 EIF4EBP2Q13542 120 aaPredicted RBP10.95□□□□□ -0.66
SSU72-202ENST00000359060 RAB33AQ14088 237 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 DGCR6Q14129 220 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 SIM2Q14190 667 aaPredicted RBP10.95□□□□□ -0.66
SSU72-202ENST00000359060 LHX8Q68G74 356 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 ZNF783Q6ZMS7 281 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 CYP2U1Q7Z449 544 aa10.95□□□□□ -0.66
SSU72-202ENST00000359060 TMPRSS11BQ86T26 416 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms