RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 SH3KBP1Q96B97 665 aa17.41■□□□□ 0.38
PDLIM7-202ENST00000355841 UNKQ9C0B0 810 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-202ENST00000355841 TRIT1Q9H3H1 467 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-202ENST00000355841 XKR8Q9H6D3 395 aa17.41■□□□□ 0.38
PDLIM7-202ENST00000355841 KIR3DX1Q9H7L2 352 aa17.41■□□□□ 0.38
PDLIM7-202ENST00000355841 APOBEC2Q9Y235 224 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-202ENST00000355841 PCDHGA1Q9Y5H4 931 aa17.41■□□□□ 0.38
PDLIM7-202ENST00000355841 SPTBN2O15020 2390 aa17.4■□□□□ 0.38
PDLIM7-202ENST00000355841 IGHV1OR21-1A0A087WYE8 117 aa17.4■□□□□ 0.38
PDLIM7-202ENST00000355841 OPA1O60313 960 aa17.4■□□□□ 0.38
PDLIM7-202ENST00000355841 TSPAN12O95859 305 aa17.4■□□□□ 0.38
PDLIM7-202ENST00000355841 PNLIPP16233 465 aa17.4■□□□□ 0.38
PDLIM7-202ENST00000355841 CD9P21926 228 aa17.4■□□□□ 0.38
PDLIM7-202ENST00000355841 ATP5DP30049 168 aa17.4■□□□□ 0.38
PDLIM7-202ENST00000355841 GPR3P46089 330 aa17.4■□□□□ 0.38
PDLIM7-202ENST00000355841 NR1D2Q14995 579 aa17.4■□□□□ 0.38
PDLIM7-202ENST00000355841 CCSMST1Q4G0I0 132 aa17.4■□□□□ 0.38
PDLIM7-202ENST00000355841 SPATA6LQ8N4H0 392 aa17.4■□□□□ 0.38
PDLIM7-202ENST00000355841 LMNTD1Q8N9Z9 388 aa17.4■□□□□ 0.38
PDLIM7-202ENST00000355841 AVL9Q8NBF6 648 aa17.4■□□□□ 0.38
PDLIM7-202ENST00000355841 OR2W6PQ8NHA6 318 aa17.4■□□□□ 0.38
PDLIM7-202ENST00000355841 OR5K2Q8NHB8 316 aa17.4■□□□□ 0.38
PDLIM7-202ENST00000355841 ANKRD49Q8WVL7 239 aa17.4■□□□□ 0.38
PDLIM7-202ENST00000355841 LRRN3Q9H3W5 708 aa17.4■□□□□ 0.38
PDLIM7-202ENST00000355841 MVB12BQ9H7P6 319 aa17.4■□□□□ 0.38
PDLIM7-202ENST00000355841 GPAMQ9HCL2 828 aa17.4■□□□□ 0.38
PDLIM7-202ENST00000355841 MATN4O95460 622 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 TPBGLP0DKB5 382 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 STMN1P16949 149 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 ZNF37AP17032 561 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 CD1CP29017 333 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 IL2P60568 153 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 INSM1Q01101 510 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 ILKQ13418 452 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 TMPRSS9Q7Z410 1059 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 MARCH9Q86YJ5 346 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 TBC1D21Q8IYX1 336 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 OR4E2Q8NGC2 313 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 OR52E1Q8NGJ3 308 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 DHRS4Q9BTZ2 278 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 SMIM23A6NLE4 172 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 UBXN7O94888 489 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 DKK1O94907 266 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 C1orf105O95561 183 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 TUBBP07437 444 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 CBSLP0DN79 551 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 ENO3P13929 434 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 MPSTP25325 297 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 NDUFS1P28331 727 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 CBSP35520 551 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 SLCO1A2P46721 670 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 RGS4P49798 205 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 RAB10P61026 200 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 CFHR1Q03591 330 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 N4BP2L1Q5TBK1 243 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 UNC5DQ6UXZ4 953 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 RBM12BQ8IXT5 1001 aaKnown RBP17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 LCN9Q8WX39 176 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 RSC1A1Q92681 617 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 AHCYL2Q96HN2 611 aaKnown RBP17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 FOPNLQ96NB1 174 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 NUDT22Q9BRQ3 303 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 UCK1Q9HA47 277 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 OGFRQ9NZT2 677 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 CTNNAL1Q9UBT7 734 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 ADAMTS6Q9UKP5 1117 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 IKZF3Q9UKT9 509 aa17.39■□□□□ 0.37
PDLIM7-202ENST00000355841 LILRA5A6NI73 299 aa17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 ARHGEF33A8MVX0 844 aa17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 HOXB3P14651 431 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 AMD1P17707 334 aa17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 CSF2RBP32927 897 aa17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 ZKSCAN8Q15776 578 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 NEK10Q6ZWH5 1172 aa17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 RAPH1Q70E73 1250 aa17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 DGLUCYQ7Z3D6 616 aa17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 OR10G6Q8NH81 332 aa17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 ASB11Q8WXH4 323 aa17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 NCSTNQ92542 709 aa17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 DLG3Q92796 817 aa17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 ZBTB9Q96C00 473 aa17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 TSPAN17Q96FV3 270 aa17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 IL17FQ96PD4 163 aa17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 GFM1Q96RP9 751 aaKnown RBP17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 ZMYND15Q9H091 742 aa17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 TMEM9Q9P0T7 183 aa17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 TBK1Q9UHD2 729 aa17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 ICKQ9UPZ9 632 aa17.38■□□□□ 0.37
PDLIM7-202ENST00000355841 OR6C74A6NCV1 312 aa17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 AGRPO00253 132 aa17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 NTN3O00634 580 aaPredicted RBP17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 PSIP1O75475 530 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 WISP3O95389 354 aaPredicted RBP17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 TOP3BO95985 862 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 ALDOAP04075 364 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 MPC1LP0DKB6 136 aa17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 PPP1CAP62136 330 aa17.37■□□□□ 0.37
PDLIM7-202ENST00000355841 E2F1Q01094 437 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms