RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 NPY2RP49146 381 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 RFX4Q33E94 735 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 ZC3H12BQ5HYM0 836 aaKnown RBP13.01□□□□□ -0.33
IFT88-202ENST00000351808 C6orf132Q5T0Z8 1188 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 MAP1SQ66K74 1059 aaPredicted RBP13.01□□□□□ -0.33
IFT88-202ENST00000351808 TMEM81Q6P7N7 255 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 FNDC5Q8NAU1 212 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 NLGN4YQ8NFZ3 816 aaPredicted RBP13.01□□□□□ -0.33
IFT88-202ENST00000351808 OR7D4Q8NG98 312 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 VANGL1Q8TAA9 524 aaPredicted RBP13.01□□□□□ -0.33
IFT88-202ENST00000351808 GPR151Q8TDV0 419 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 RIT1Q92963 219 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 ISG20Q96AZ6 181 aaKnown RBP13.01□□□□□ -0.33
IFT88-202ENST00000351808 ALG9Q9H6U8 611 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 POLMQ9NP87 494 aaPredicted RBP13.01□□□□□ -0.33
IFT88-202ENST00000351808 TMPRSS4Q9NRS4 437 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 ABCB8Q9NUT2 735 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 STOML2Q9UJZ1 356 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 HSPE1-MOB4S4R3N1 261 aa13.01□□□□□ -0.33
IFT88-202ENST00000351808 AZIN1O14977 448 aa13□□□□□ -0.33
IFT88-202ENST00000351808 GSTA4O15217 222 aa13□□□□□ -0.33
IFT88-202ENST00000351808 SIX3O95343 332 aaPredicted RBP13□□□□□ -0.33
IFT88-202ENST00000351808 RPS3P23396 243 aaKnown RBP eCLIP13□□□□□ -0.33
IFT88-202ENST00000351808 PTPN3P26045 913 aa13□□□□□ -0.33
IFT88-202ENST00000351808 GNPDA1P46926 289 aa13□□□□□ -0.33
IFT88-202ENST00000351808 POLR2JP52435 117 aaKnown RBP13□□□□□ -0.33
IFT88-202ENST00000351808 CRISP3P54108 245 aa13□□□□□ -0.33
IFT88-202ENST00000351808 RGS1Q08116 209 aa13□□□□□ -0.33
IFT88-202ENST00000351808 EMC2Q15006 297 aa13□□□□□ -0.33
IFT88-202ENST00000351808 ZNF79Q15937 498 aa13□□□□□ -0.33
IFT88-202ENST00000351808 PLA2G4EQ3MJ16 856 aa13□□□□□ -0.33
IFT88-202ENST00000351808 LIPIQ6XZB0 460 aa13□□□□□ -0.33
IFT88-202ENST00000351808 DET1Q7L5Y6 550 aa13□□□□□ -0.33
IFT88-202ENST00000351808 TLK2Q86UE8 772 aa13□□□□□ -0.33
IFT88-202ENST00000351808 COMMD7Q86VX2 200 aa13□□□□□ -0.33
IFT88-202ENST00000351808 OR10Q1Q8NGQ4 319 aa13□□□□□ -0.33
IFT88-202ENST00000351808 NUDT8Q8WV74 236 aa13□□□□□ -0.33
IFT88-202ENST00000351808 SIGLEC11Q96RL6 698 aa13□□□□□ -0.33
IFT88-202ENST00000351808 COPS4Q9BT78 406 aa13□□□□□ -0.33
IFT88-202ENST00000351808 TBCDQ9BTW9 1192 aa13□□□□□ -0.33
IFT88-202ENST00000351808 TRMOQ9BU70 441 aa13□□□□□ -0.33
IFT88-202ENST00000351808 IFT22Q9H7X7 185 aa13□□□□□ -0.33
IFT88-202ENST00000351808 LINC01387J3KSC0 135 aa13□□□□□ -0.33
IFT88-202ENST00000351808 CILPO75339 1184 aa13□□□□□ -0.33
IFT88-202ENST00000351808 PAPSS2O95340 614 aaPredicted RBP13□□□□□ -0.33
IFT88-202ENST00000351808 PFKMP08237 780 aa13□□□□□ -0.33
IFT88-202ENST00000351808 HSMCR30P0CW71 290 aa13□□□□□ -0.33
IFT88-202ENST00000351808 EFNA1P20827 205 aaPredicted RBP13□□□□□ -0.33
IFT88-202ENST00000351808 SLC1A2P43004 574 aa13□□□□□ -0.33
IFT88-202ENST00000351808 KIR2DL3P43628 341 aa13□□□□□ -0.33
IFT88-202ENST00000351808 SLC6A3Q01959 620 aa13□□□□□ -0.33
IFT88-202ENST00000351808 RIN1Q13671 783 aa13□□□□□ -0.33
IFT88-202ENST00000351808 AANATQ16613 207 aa13□□□□□ -0.33
IFT88-202ENST00000351808 ARHGAP17Q68EM7 881 aa13□□□□□ -0.33
IFT88-202ENST00000351808 CAPN13Q6MZZ7 669 aaPredicted RBP13□□□□□ -0.33
IFT88-202ENST00000351808 ESRP1Q6NXG1 681 aaKnown RBP13□□□□□ -0.33
IFT88-202ENST00000351808 LRRC8DQ7L1W4 858 aa13□□□□□ -0.33
IFT88-202ENST00000351808 DGLUCYQ7Z3D6 616 aa13□□□□□ -0.33
IFT88-202ENST00000351808 PODNQ7Z5L7 613 aa13□□□□□ -0.33
IFT88-202ENST00000351808 FAM131BQ86XD5 332 aa13□□□□□ -0.33
IFT88-202ENST00000351808 SLC22A9Q8IVM8 553 aa13□□□□□ -0.33
IFT88-202ENST00000351808 ANKRD49Q8WVL7 239 aa13□□□□□ -0.33
IFT88-202ENST00000351808 DNAJA4Q8WW22 397 aaPredicted RBP13□□□□□ -0.33
IFT88-202ENST00000351808 DNASE1L2Q92874 299 aa13□□□□□ -0.33
IFT88-202ENST00000351808 RHBDF1Q96CC6 855 aa13□□□□□ -0.33
IFT88-202ENST00000351808 MAGEB10Q96LZ2 347 aaPredicted RBP13□□□□□ -0.33
IFT88-202ENST00000351808 TAAR1Q96RJ0 339 aa13□□□□□ -0.33
IFT88-202ENST00000351808 CAMKK2Q96RR4 588 aa13□□□□□ -0.33
IFT88-202ENST00000351808 GTPBP2Q9BX10 602 aaKnown RBP13□□□□□ -0.33
IFT88-202ENST00000351808 AUP1Q9Y679 476 aa13□□□□□ -0.33
IFT88-202ENST00000351808 V9GYH0 126 aa13□□□□□ -0.33
IFT88-202ENST00000351808 WBP4O75554 376 aaKnown RBP12.99□□□□□ -0.33
IFT88-202ENST00000351808 PPM1BO75688 479 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 SLC22A3O75751 556 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 LTA4HP09960 611 aaKnown RBP12.99□□□□□ -0.33
IFT88-202ENST00000351808 CPB1P15086 417 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 CYP2B6P20813 491 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 DNAJB2P25686 324 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 HLA-DMAP28067 261 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 SCN1BQ07699 218 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 KCTD11Q693B1 232 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 TIGD3Q6B0B8 471 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 CFAP77Q6ZQR2 320 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 PAF1Q8N7H5 531 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 DCLRE1CQ96SD1 692 aaKnown RBP12.99□□□□□ -0.33
IFT88-202ENST00000351808 BCO2Q9BYV7 579 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 PPIL3Q9H2H8 161 aaKnown RBP12.99□□□□□ -0.33
IFT88-202ENST00000351808 PPA2Q9H2U2 334 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 DYRK4Q9NR20 520 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 FAM105AQ9NUU6 356 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 BTG4Q9NY30 223 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 VNN3Q9NY84 501 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 GMEB2Q9UKD1 530 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 HOXC6P09630 235 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 HMGCLP35914 325 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 NRIP1P48552 1158 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 CPT1AP50416 773 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 CYP4F2P78329 520 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 CYP4F3Q08477 520 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 MADCAM1Q13477 382 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms