RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 LRRC3BQ96PB8 259 aa23.2■■□□□ 1.3
USP25-203ENST00000351097 CDK15Q96Q40 435 aa23.2■■□□□ 1.3
USP25-203ENST00000351097 CPEB1Q9BZB8 566 aaKnown RBP23.2■■□□□ 1.3
USP25-203ENST00000351097 SUV39H2Q9H5I1 410 aa23.2■■□□□ 1.3
USP25-203ENST00000351097 MARK1Q9P0L2 795 aa23.2■■□□□ 1.3
USP25-203ENST00000351097 ZMYM5Q9UJ78 669 aa23.2■■□□□ 1.3
USP25-203ENST00000351097 PRR23BQ6ZRT6 265 aa23.2■■□□□ 1.3
USP25-203ENST00000351097 FRA10AC1Q70Z53 315 aa23.2■■□□□ 1.3
USP25-203ENST00000351097 NAT16Q8N8M0 369 aa23.2■■□□□ 1.3
USP25-203ENST00000351097 ZNF557Q8N988 423 aaPredicted RBP23.2■■□□□ 1.3
USP25-203ENST00000351097 METTL6Q8TCB7 284 aa23.2■■□□□ 1.3
USP25-203ENST00000351097 CYGBQ8WWM9 190 aa23.2■■□□□ 1.3
USP25-203ENST00000351097 OTUB2Q96DC9 234 aa23.2■■□□□ 1.3
USP25-203ENST00000351097 PDLIM5Q96HC4 596 aaKnown RBP23.2■■□□□ 1.3
USP25-203ENST00000351097 ZDHHC6Q9H6R6 413 aa23.2■■□□□ 1.3
USP25-203ENST00000351097 TNPO3Q9Y5L0 923 aaKnown RBP23.2■■□□□ 1.3
USP25-203ENST00000351097 KLHL33A6NCF5 533 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 TRIM64A6NGJ6 449 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 IQCF5A8MTL0 148 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 LDLRP01130 860 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 POU2F2P09086 479 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 RPL10P27635 214 aaKnown RBP23.19■■□□□ 1.3
USP25-203ENST00000351097 ESRRGP62508 458 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 SEMG2Q02383 582 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 NFATC2Q13469 925 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 GPM6BQ13491 265 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 DMC1Q14565 340 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 PCBP2Q15366 365 aaKnown RBP eCLIP23.19■■□□□ 1.33e-6■■■■□ 22.2
USP25-203ENST00000351097 SLC2A7Q6PXP3 512 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 Q6ZVU0 165 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 SNX20Q7Z614 316 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 KIAA0907Q7Z7F0 614 aaPredicted RBP23.19■■□□□ 1.3
USP25-203ENST00000351097 SERPINA9Q86WD7 417 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 SFRP1Q8N474 314 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 OSCP1Q8WVF1 389 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 SCRN2Q96FV2 425 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 RPF2Q9H7B2 306 aaKnown RBP23.19■■□□□ 1.3
USP25-203ENST00000351097 DPP7Q9UHL4 492 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 DHRS7Q9Y394 339 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 PPIL1Q9Y3C6 166 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 ST14Q9Y5Y6 855 aa23.19■■□□□ 1.3
USP25-203ENST00000351097 PRMT5O14744 637 aaPredicted RBP23.18■■□□□ 1.3
USP25-203ENST00000351097 POP4O95707 220 aaKnown RBP23.18■■□□□ 1.3
USP25-203ENST00000351097 CAPN1P07384 714 aa23.18■■□□□ 1.3
USP25-203ENST00000351097 HRH2P25021 359 aa23.18■■□□□ 1.3
USP25-203ENST00000351097 SOX11P35716 441 aa23.18■■□□□ 1.3
USP25-203ENST00000351097 ARL1P40616 181 aaPredicted RBP23.18■■□□□ 1.3
USP25-203ENST00000351097 PDE12Q6L8Q7 609 aaKnown RBP23.18■■□□□ 1.3
USP25-203ENST00000351097 CRTC1Q6UUV9 634 aa23.18■■□□□ 1.3
USP25-203ENST00000351097 GPR141Q7Z602 305 aa23.18■■□□□ 1.3
USP25-203ENST00000351097 ADAMTS16Q8TE57 1224 aa23.18■■□□□ 1.3
USP25-203ENST00000351097 BIRC7Q96CA5 298 aa23.18■■□□□ 1.3
USP25-203ENST00000351097 ASB8Q9H765 288 aa23.18■■□□□ 1.3
USP25-203ENST00000351097 SMPD3Q9NY59 655 aaPredicted RBP23.18■■□□□ 1.3
USP25-203ENST00000351097 CLOCKO15516 846 aa23.18■■□□□ 1.3
USP25-203ENST00000351097 CDK4P11802 303 aa23.18■■□□□ 1.3
USP25-203ENST00000351097 LRRC23Q53EV4 343 aaPredicted RBP23.18■■□□□ 1.3
USP25-203ENST00000351097 IL27RAQ6UWB1 636 aa23.18■■□□□ 1.3
USP25-203ENST00000351097 TPRG1Q6ZUI0 275 aa23.18■■□□□ 1.3
USP25-203ENST00000351097 ADAMTSL2Q86TH1 951 aa23.18■■□□□ 1.3
USP25-203ENST00000351097 C12orf76Q8N812 135 aaPredicted RBP23.18■■□□□ 1.3
USP25-203ENST00000351097 CHST14Q8NCH0 376 aa23.18■■□□□ 1.3
USP25-203ENST00000351097 USP22Q9UPT9 525 aa23.18■■□□□ 1.3
USP25-203ENST00000351097 PCDHB1Q9Y5F3 818 aa23.18■■□□□ 1.3
USP25-203ENST00000351097 FADS3Q9Y5Q0 445 aa23.18■■□□□ 1.3
USP25-203ENST00000351097 GOLGA8CPA6NN73 597 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 UGT2B4P06133 528 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 CAPGP40121 348 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 RPS9P46781 194 aaKnown RBP23.17■■□□□ 1.3
USP25-203ENST00000351097 HTR6P50406 440 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 GOLGA7Q7Z5G4 137 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 CBARPQ8N350 705 aaPredicted RBP23.17■■□□□ 1.3
USP25-203ENST00000351097 DHRSXQ8N5I4 330 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 FBXL20Q96IG2 436 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 MCCC1Q96RQ3 725 aaPredicted RBP23.17■■□□□ 1.3
USP25-203ENST00000351097 BOCQ9BWV1 1114 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 MAGEL2Q9UJ55 1249 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 ZFC3H1O60293 1989 aaKnown RBP23.17■■□□□ 1.3
USP25-203ENST00000351097 SCN8AQ9UQD0 1980 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 TRBV5-4A0A0C4DH59 114 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 GLYATL1P3A0A0U1RQE8 302 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 SEC24DO94855 1032 aaPredicted RBP23.17■■□□□ 1.3
USP25-203ENST00000351097 ITGALP20701 1170 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 OR4D2P58180 307 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 HABP4Q5JVS0 413 aaKnown RBP23.17■■□□□ 1.3
USP25-203ENST00000351097 ABRAXAS1Q6UWZ7 409 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 DLEU7Q6UYE1 221 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 OR2A12Q8NGT7 310 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 B4GALNT2Q8NHY0 566 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 SMG7Q92540 1137 aaKnown RBP23.17■■□□□ 1.3
USP25-203ENST00000351097 NSMCE2Q96MF7 247 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 ZNF641Q96N77 438 aaPredicted RBP23.17■■□□□ 1.3
USP25-203ENST00000351097 ZNF639Q9UID6 485 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 PCDHB3Q9Y5E6 796 aa23.17■■□□□ 1.3
USP25-203ENST00000351097 ARNTLO00327 626 aa23.16■■□□□ 1.3
USP25-203ENST00000351097 IFRD1O00458 451 aaPredicted RBP23.16■■□□□ 1.3
USP25-203ENST00000351097 S100BP04271 92 aaPredicted RBP23.16■■□□□ 1.3
USP25-203ENST00000351097 ZNF7P17097 686 aaPredicted RBP23.16■■□□□ 1.3
USP25-203ENST00000351097 UGT1A1P22309 533 aa23.16■■□□□ 1.3
USP25-203ENST00000351097 UGT1A4P22310 534 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms