RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 XPAP23025 273 aaPredicted RBP13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 DCDC1P59894 354 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 ELAVL3Q14576 367 aaKnown RBP13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 GALNTL6Q49A17 601 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 ARSIQ5FYB1 569 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 BROXQ5VW32 411 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 NAPRTQ6XQN6 538 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 DPPA4Q7L190 304 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 TRIM69Q86WT6 500 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 KIRREL3Q8IZU9 778 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 NXPE1Q8N323 547 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 SPATA6LQ8N4H0 392 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 FITM2Q8N6M3 262 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 DTX3LQ8TDB6 740 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 OR8D1Q8WZ84 308 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 TTC9Q92623 222 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 CDH19Q9H159 772 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 ZNF395Q9H8N7 513 aaPredicted RBP13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 DNAJC28Q9NX36 388 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 NCKIPSDQ9NZQ3 722 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 HAO1Q9UJM8 370 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 SLC12A4Q9UP95 1085 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 DMTF1Q9Y222 760 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 SSUH2Q9Y2M2 353 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 MED16Q9Y2X0 877 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 RAP2CQ9Y3L5 183 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 MAST4O15021 2626 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 A8MT66 165 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 PLRG1O43660 514 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 OR1I1O60431 355 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 SDC3O75056 442 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 IPO13O94829 963 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 SPINT3P49223 89 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 ERVPABLB-1P60509 514 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 PTSQ03393 145 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 PRKAA1Q13131 559 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 CHRNA6Q15825 494 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 SETMARQ53H47 684 aaPredicted RBP13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 PAQR3Q6TCH7 311 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 ISCA2Q86U28 154 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 RAVER1Q8IY67 606 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 LSMEM2Q8N112 164 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 SLC25A45Q8N413 288 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 GPR26Q8NDV2 337 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 TMIEQ8NEW7 156 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 OR4C6Q8NH72 309 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 CD200R1Q8TD46 325 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 STON2Q8WXE9 905 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 KIAA1191Q96A73 305 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 ERP27Q96DN0 273 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 NAF1Q96HR8 494 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 MYLK2Q9H1R3 596 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 ALG9Q9H6U8 611 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 CPNE5Q9HCH3 593 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 ZDHHC3Q9NYG2 299 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 MARCOQ9UEW3 520 aaPredicted RBP13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 ZFP69BQ9UJL9 534 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 TMCO1Q9UM00 188 aa13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 TDRD6O60522 2096 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-202ENST00000344114 RGSL1A5PLK6 1076 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 SYCE1LA8MT33 242 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 B8ZZF3 427 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 PSMD11O00231 422 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 ZBTB14O43829 449 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 KERAO60938 352 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 NIPSNAP2O75323 286 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 ATP5HO75947 161 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 GIMD1P0DJR0 217 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 TPBGLP0DKB5 382 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 KITP10721 976 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 TIMP2P16035 220 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 ITGB7P26010 798 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 ARRB2P32121 409 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 MMP12P39900 470 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 SCTRP47872 440 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 METAP1P53582 386 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 NAGLUP54802 743 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 AQP5P55064 265 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 DAB2P98082 770 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 CFAP157Q5JU67 520 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 ARHGAP40Q5TG30 622 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 FAM91A1Q658Y4 838 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 PTRHD1Q6GMV3 140 aaKnown RBP13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 ERAP2Q6P179 960 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 PTERQ96BW5 349 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 L3HYPDHQ96EM0 354 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 PPP1R16AQ96I34 528 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 CNDP1Q96KN2 507 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 UNKQ9C0B0 810 aaKnown RBP13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 ILKAPQ9H0C8 392 aaPredicted RBP13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 CLMPQ9H6B4 373 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 PCDH12Q9NPG4 1184 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 TXLNGQ9NUQ3 528 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 SMOXQ9NWM0 555 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 HEY2Q9UBP5 337 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 DHRS7Q9Y394 339 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 PCM1Q15154 2024 aa13.22□□□□□ -0.29
HERPUD1-202ENST00000344114 IGLV3-16A0A075B6K0 115 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms