RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 GPR45Q9Y5Y3 372 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 ST14Q9Y5Y6 855 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 PRSS51A0A1B0GVH4 220 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 PRORSD1PA6NEY8 169 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 BBIP1A8MTZ0 92 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 TXNDC9O14530 226 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 KPNA5O15131 536 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 SGTAO43765 313 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 FTH1P02794 183 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 HIST1H2AGP0C0S8 130 aaPredicted RBP18.2■□□□□ 0.5
HOXA9-201ENST00000343483 EPB42P16452 691 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 HIST1H2ADP20671 130 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 ERVK-8P63133 956 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 LDLRAP1Q5SW96 308 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 RAVER1Q8IY67 606 aaKnown RBP18.2■□□□□ 0.5
HOXA9-201ENST00000343483 LILRA2Q8N149 483 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 CPA6Q8N4T0 437 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 PCYOX1LQ8NBM8 494 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 TMIEQ8NEW7 156 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 ASB11Q8WXH4 323 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 HIST1H2AHQ96KK5 128 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 BTBD9Q96Q07 612 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 HIST1H2AJQ99878 128 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 PKP2Q99959 881 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 H2AFJQ9BTM1 129 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 SLC12A9Q9BXP2 914 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 AIG1Q9NVV5 245 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 CDH7Q9ULB5 785 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 SUFUQ9UMX1 484 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 ATG2AQ2TAZ0 1938 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 PIKFYVEQ9Y2I7 2098 aa18.2■□□□□ 0.5
HOXA9-201ENST00000343483 FFAR3O14843 346 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 ANGPT2O15123 496 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 GPR42O15529 346 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 SPINT1O43278 529 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 SYNCRIPO60506 623 aaKnown RBP18.19■□□□□ 0.5
HOXA9-201ENST00000343483 MATN4O95460 622 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 CAPN3P20807 821 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 ABRAXAS2Q15018 415 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 SAMD4BQ5PRF9 694 aaKnown RBP18.19■□□□□ 0.5
HOXA9-201ENST00000343483 C6orf136Q5SQH8 315 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 C8orf82Q6P1X6 216 aaPredicted RBP18.19■□□□□ 0.5
HOXA9-201ENST00000343483 Q6ZSR9 355 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 CATSPER1Q8NEC5 780 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 ASZ1Q8WWH4 475 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 ROPN1LQ96C74 230 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 SLC39A3Q9BRY0 314 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 TMEM181Q9P2C4 612 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 ANTXRLA6NF34 631 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 TMEM202A6NGA9 273 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 ENO2P09104 434 aaPredicted RBP18.19■□□□□ 0.5
HOXA9-201ENST00000343483 MPC1LP0DKB6 136 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 PIK3CGP48736 1102 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 FOLH1Q04609 750 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 TRAP1Q12931 704 aaKnown RBP18.19■□□□□ 0.5
HOXA9-201ENST00000343483 RUNX3Q13761 415 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 NR6A1Q15406 480 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 RETREG3Q86VR2 466 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 YAF2Q8IY57 180 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 SFRP1Q8N474 314 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 RASGEF1AQ8N9B8 481 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 VPS35Q96QK1 796 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 TMEM245Q9H330 911 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 IL1RL2Q9HB29 575 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 CD300AQ9UGN4 299 aa18.19■□□□□ 0.5
HOXA9-201ENST00000343483 KRT87PA6NCN2 255 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 PSMD11O00231 422 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 TSPAN6O43657 245 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 ADRB3P13945 408 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 IGFBP4P22692 258 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 OPRD1P41143 372 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 SLC7A2P52569 658 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 CTSCP53634 463 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 SYTL3Q4VX76 610 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 METTL2BQ6P1Q9 378 aaKnown RBP18.18■□□□□ 0.5
HOXA9-201ENST00000343483 SYCE2Q6PIF2 218 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 MMAAQ8IVH4 418 aaKnown RBP18.18■□□□□ 0.5
HOXA9-201ENST00000343483 NRSN1Q8IZ57 195 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 ADCY4Q8NFM4 1077 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 SUSD6Q92537 303 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 DTD2Q96FN9 168 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 PPP1R16AQ96I34 528 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 TEX37Q96LM6 180 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 COQ10AQ96MF6 247 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 FAM129BQ96TA1 746 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 KXD1Q9BQD3 176 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 PLA2G2FQ9BZM2 168 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 YIPF3Q9GZM5 350 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 DYRK4Q9NR20 520 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 KLQ9UEF7 1012 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 NDUFAF1Q9Y375 327 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 RNF11Q9Y3C5 154 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 H0Y858 1186 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 KIF1CO43896 1103 aaKnown RBP18.18■□□□□ 0.5
HOXA9-201ENST00000343483 C8BP07358 591 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 GJA4P35212 333 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 FCHO2Q0JRZ9 810 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 ELP6Q0PNE2 266 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 MAP7D1Q3KQU3 841 aa18.18■□□□□ 0.5
HOXA9-201ENST00000343483 CDKL4Q5MAI5 379 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms