RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 EPGNQ6UW88 154 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 CHST9Q7L1S5 443 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 METTL3Q86U44 580 aaKnown RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 FAM72BQ86X60 149 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 GALNT12Q8IXK2 581 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 ELMOD2Q8IZ81 293 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 OR8H1Q8NGG4 311 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 SLC13A3Q8WWT9 602 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 GTPBP3Q969Y2 492 aaKnown RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 ASB9Q96DX5 294 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 SPACA7Q96KW9 195 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 SLC38A2Q96QD8 506 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 MTERF1Q99551 399 aaKnown RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 MIOSQ9NXC5 875 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 OAZ3Q9UMX2 235 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 C5P01031 1676 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 TOPAZ1Q8N9V7 1692 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 C1QTNF3-AMACRE9PGA6 284 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 CDC7O00311 574 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 SAP18O00422 153 aaKnown RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 GABRDO14764 452 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 SEPT4O43236 478 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 ATG13O75143 517 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 PRKD3O94806 890 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 PRG2P13727 222 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 RPL3P39023 403 aaKnown RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 KCNQ1P51787 676 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 FKBP1BP68106 108 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 SIX1Q15475 284 aaPredicted RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 NUP188Q5SRE5 1749 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 RELL1Q8IUW5 271 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 TMEM126BQ8IUX1 230 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 GPR65Q8IYL9 337 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 ASCC1Q8N9N2 400 aaKnown RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 BRI3BPQ8WY22 251 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 ING5Q8WYH8 240 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 HAPLN2Q9GZV7 340 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 FAM83DQ9H4H8 585 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 CCNB1IP1Q9NPC3 277 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 ING3Q9NXR8 418 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 TMEM9Q9P0T7 183 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 GALPQ9UBC7 116 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 PTBP2Q9UKA9 531 aaKnown RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 TLR6Q9Y2C9 796 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 LRRC37A3O60309 1634 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 ZNF99A8MXY4 864 aaPredicted RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 TPST2O60704 377 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 SERPINB7O75635 380 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 GLUD1P00367 558 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 CHRM5P08912 532 aaPredicted RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 GTF2E2P29084 291 aaKnown RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 TLX1P31314 330 aaPredicted RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 PTGER3P43115 390 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 CDH12P55289 794 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 TAS2R41P59536 307 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 CBX2Q14781 532 aaPredicted RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 TAB1Q15750 504 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 TRIM71Q2Q1W2 868 aaKnown RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 HLA-DQA1Q5Y7H0 255 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 C17orf64Q86WR6 236 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 CCDC28AQ8IWP9 274 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 COLGALT2Q8IYK4 626 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 ZNF557Q8N988 423 aaPredicted RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 FBXO22Q8NEZ5 403 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 DBF4BQ8NFT6 615 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 OR10Q1Q8NGQ4 319 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 NPLOC4Q8TAT6 608 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 TEX47Q8TBZ9 253 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 CSGALNACT1Q8TDX6 532 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 ABCB9Q9NP78 766 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 INTS7Q9NVH2 962 aaKnown RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 MTX2O75431 263 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 BCAS2O75934 225 aaPredicted RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 ESR1P03372 595 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 TFAP2AP05549 437 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 OGNP20774 298 aaKnown RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 C4BPBP20851 252 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 PRKACBP22694 351 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 RPL4P36578 427 aaKnown RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 CSKP41240 450 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 RNASE12Q5GAN4 147 aaKnown RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 GDF6Q6KF10 455 aaPredicted RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 ZDHHC21Q8IVQ6 265 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 CD99L2Q8TCZ2 262 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 RAD51AP1Q96B01 352 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 AP2M1Q96CW1 435 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 FCRL3Q96P31 734 aaPredicted RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 ZNF607Q96SK3 696 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 PTPN18Q99952 460 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 CHCHD6Q9BRQ6 235 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 FBRSL1Q9HCM7 1045 aaKnown RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 SUCOQ9UBS9 1254 aaKnown RBP7.93□□□□□ -1.14
UBE4B-202ENST00000343090 SSR3Q9UNL2 185 aa7.93□□□□□ -1.14
UBE4B-202ENST00000343090 MYH6P13533 1939 aa7.92□□□□□ -1.14
UBE4B-202ENST00000343090 SYN3O14994 580 aa7.92□□□□□ -1.14
UBE4B-202ENST00000343090 ARPC2O15144 300 aa7.92□□□□□ -1.14
UBE4B-202ENST00000343090 CPNE3O75131 537 aaKnown RBP7.92□□□□□ -1.14
UBE4B-202ENST00000343090 UGT2B17O75795 530 aa7.92□□□□□ -1.14
UBE4B-202ENST00000343090 FGF3P11487 239 aaPredicted RBP7.92□□□□□ -1.14
UBE4B-202ENST00000343090 FMO3P31513 532 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms