RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ZNF697Q5TEC3 545 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 OGFOD2Q6N063 350 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 MED27Q6P2C8 311 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 CHPFQ8IZ52 775 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 SLC34A3Q8N130 599 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 MARVELD2Q8N4S9 558 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 RHEBL1Q8TAI7 183 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 ANKRD49Q8WVL7 239 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 FBXL20Q96IG2 436 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 PAWRQ96IZ0 340 aaKnown RBP7.06□□□□□ -1.28
VCAN-202ENST00000342785 ZNF607Q96SK3 696 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 GPR62Q9BZJ7 368 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 CRISPLD1Q9H336 500 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 PTGDR2Q9Y5Y4 395 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 PER2O15055 1255 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 C8AP07357 584 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 TNNI3P19429 210 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 PRPS1L1P21108 318 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 GLDCP23378 1020 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 BUD31P41223 144 aaPredicted RBP7.06□□□□□ -1.28
VCAN-202ENST00000342785 AFF1P51825 1210 aaKnown RBP7.06□□□□□ -1.28
VCAN-202ENST00000342785 SKIV2LQ15477 1246 aaKnown RBP7.06□□□□□ -1.28
VCAN-202ENST00000342785 USP39Q53GS9 565 aaKnown RBP7.06□□□□□ -1.28
VCAN-202ENST00000342785 TPGS2Q68CL5 300 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 DENND5AQ6IQ26 1287 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 PDE12Q6L8Q7 609 aaKnown RBP7.06□□□□□ -1.28
VCAN-202ENST00000342785 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.06□□□□□ -1.28
VCAN-202ENST00000342785 ISCA2Q86U28 154 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 DNAJB8Q8NHS0 232 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 ZUFSPQ96AP4 578 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 MCMBPQ9BTE3 642 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 YTHDF1Q9BYJ9 559 aaKnown RBP7.06□□□□□ -1.28
VCAN-202ENST00000342785 RHBGQ9H310 441 aa7.06□□□□□ -1.28
VCAN-202ENST00000342785 KRT87PA6NCN2 255 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 PRORSD1PA6NEY8 169 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 CLIC1O00299 241 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 EFCAB14O75071 495 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 MAGEA10P43363 369 aaPredicted RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 SEPHS1P49903 392 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 TUBA4AP68366 448 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 SFSWAPQ12872 951 aaKnown RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 FRG2Q64ET8 278 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 OR4F3Q6IEY1 312 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 TMEM220Q6QAJ8 160 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 ZNF534Q76KX8 674 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 ZNF554Q86TJ5 538 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 CFAP206Q8IYR0 622 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 OR8D1Q8WZ84 308 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 TEFMQ96QE5 360 aaKnown RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 FRG2BQ96QU4 278 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 ZDHHC3Q9NYG2 299 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 NWD2Q9ULI1 1742 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 TMCC2O75069 709 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 FKTNO75072 461 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 SORBS2O94875 1100 aaKnown RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 ZNF865P0CJ78 1059 aaPredicted RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 POU2F1P14859 743 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 ATP4BP51164 291 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 PTGR1Q14914 329 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 OGFRL1Q5TC84 451 aaPredicted RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 ZNF57Q68EA5 555 aaPredicted RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 CDC73Q6P1J9 531 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 ZZZ3Q8IYH5 903 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 PDPRQ8NCN5 879 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 ACVR1CQ8NER5 493 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 OR10Q1Q8NGQ4 319 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 MYOCQ99972 504 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 SLC32A1Q9H598 525 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 KAT8Q9H7Z6 458 aaKnown RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 POPDC3Q9HBV1 291 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 CCM2LQ9NUG4 571 aaPredicted RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 IMP3Q9NV31 184 aaKnown RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 NLE1Q9NVX2 485 aaPredicted RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 RPS6KB2Q9UBS0 482 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 SEC14L3Q9UDX4 400 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 ADAM30Q9UKF2 790 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 MYO18AQ92614 2054 aaKnown RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 CCR3P51677 355 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 CDKN2DP55273 166 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 AP1S2P56377 157 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 C1QTNF8P60827 252 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 ZNF423Q2M1K9 1284 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 CMPK2Q5EBM0 449 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 GCNT6Q5T4J0 391 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 XKR5Q6UX68 686 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 GOLGA7Q7Z5G4 137 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 LUZP2Q86TE4 346 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 VANGL1Q8TAA9 524 aaPredicted RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 UBASH3BQ8TF42 649 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 AUTS2Q8WXX7 1259 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 USP7Q93009 1102 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 CHCHD6Q9BRQ6 235 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 TOR4AQ9NXH8 423 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 SLC22A14Q9Y267 594 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 AHDC1Q5TGY3 1603 aaPredicted RBP7.05□□□□□ -1.28
VCAN-202ENST00000342785 ISM1B1AKI9 464 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 KDELR3O43731 214 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 SLC28A2O43868 658 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 INHAP05111 366 aa7.05□□□□□ -1.28
VCAN-202ENST00000342785 PRKACGP22612 351 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms