RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 PON2Q15165 354 aa21.97■■□□□ 1.11
TRIM28-202ENST00000341753 KCNA10Q16322 511 aa21.97■■□□□ 1.11
TRIM28-202ENST00000341753 FBXL22Q6P050 247 aa21.97■■□□□ 1.11
TRIM28-202ENST00000341753 ZNF280BQ86YH2 543 aa21.97■■□□□ 1.11
TRIM28-202ENST00000341753 ZNF683Q8IZ20 524 aa21.97■■□□□ 1.11
TRIM28-202ENST00000341753 TEX26Q8N6G2 289 aa21.97■■□□□ 1.11
TRIM28-202ENST00000341753 PIK3C3Q8NEB9 887 aa21.97■■□□□ 1.11
TRIM28-202ENST00000341753 OR4F6Q8NGB9 312 aa21.97■■□□□ 1.11
TRIM28-202ENST00000341753 SLC13A3Q8WWT9 602 aa21.97■■□□□ 1.11
TRIM28-202ENST00000341753 TADA1Q96BN2 335 aa21.97■■□□□ 1.11
TRIM28-202ENST00000341753 NSMCE3Q96MG7 304 aa21.97■■□□□ 1.11
TRIM28-202ENST00000341753 BTBD2Q9BX70 525 aa21.97■■□□□ 1.11
TRIM28-202ENST00000341753 POLR1EQ9GZS1 481 aaKnown RBP21.97■■□□□ 1.11
TRIM28-202ENST00000341753 GORASP2Q9H8Y8 452 aa21.97■■□□□ 1.11
TRIM28-202ENST00000341753 ABI2Q9NYB9 513 aaPredicted RBP21.97■■□□□ 1.11
TRIM28-202ENST00000341753 USE1Q9NZ43 259 aa21.97■■□□□ 1.11
TRIM28-202ENST00000341753 NAALAD2Q9Y3Q0 740 aa21.97■■□□□ 1.11
TRIM28-202ENST00000341753 COMMD10Q9Y6G5 202 aa21.97■■□□□ 1.11
TRIM28-202ENST00000341753 ELOVL7A1L3X0 281 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 SLC22A1O15245 554 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 SEC24AO95486 1093 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 PCYT1AP49585 367 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 SEPHS1P49903 392 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 TBX4P57082 545 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 EPS8Q12929 822 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 HIST2H2ACQ16777 129 aaPredicted RBP21.96■■□□□ 1.11
TRIM28-202ENST00000341753 PSAPL1Q6NUJ1 521 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 SPATA2LQ8IUW3 424 aaPredicted RBP21.96■■□□□ 1.11
TRIM28-202ENST00000341753 MSRB3Q8IXL7 192 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 SVOPLQ8N434 492 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 KRTCAP2Q8N6L1 136 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 GIPC2Q8TF65 315 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 RMDN1Q96DB5 314 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 SERPINB11Q96P15 392 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 TRIM62Q9BVG3 475 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 BPIFA1Q9NP55 256 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 PCDHB14Q9Y5E9 798 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 MANSC4A6NHS7 340 aaPredicted RBP21.96■■□□□ 1.11
TRIM28-202ENST00000341753 WASH4PA8MWX3 477 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 ARNTLO00327 626 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 TNFRSF10BO14763 440 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 RAMP2O60895 175 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 SERPINA1P01009 418 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 CCND3P30281 292 aaPredicted RBP21.96■■□□□ 1.11
TRIM28-202ENST00000341753 FLT3LGP49771 235 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 SGO1Q5FBB7 561 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 SPANXN4Q5MJ08 99 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 MRPL10Q7Z7H8 261 aaKnown RBP21.96■■□□□ 1.11
TRIM28-202ENST00000341753 DYNC2LI1Q8TCX1 351 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 TMEM248Q9NWD8 314 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 TRMT6Q9UJA5 497 aaKnown RBP21.96■■□□□ 1.11
TRIM28-202ENST00000341753 ITGB1BP2Q9UKP3 347 aa21.96■■□□□ 1.11
TRIM28-202ENST00000341753 MT-ND2P03891 347 aa21.95■■□□□ 1.1
TRIM28-202ENST00000341753 ITGB6P18564 788 aa21.95■■□□□ 1.1
TRIM28-202ENST00000341753 HLA-DPA1P20036 260 aa21.95■■□□□ 1.1
TRIM28-202ENST00000341753 GSSP48637 474 aa21.95■■□□□ 1.1
TRIM28-202ENST00000341753 DDR2Q16832 855 aa21.95■■□□□ 1.1
TRIM28-202ENST00000341753 SLC39A12Q504Y0 691 aa21.95■■□□□ 1.1
TRIM28-202ENST00000341753 OR8J3Q8NGG0 315 aa21.95■■□□□ 1.1
TRIM28-202ENST00000341753 OR5K1Q8NHB7 308 aa21.95■■□□□ 1.1
TRIM28-202ENST00000341753 NETO1Q8TDF5 533 aa21.95■■□□□ 1.1
TRIM28-202ENST00000341753 GTF2H4Q92759 462 aa21.95■■□□□ 1.1
TRIM28-202ENST00000341753 DACH2Q96NX9 599 aa21.95■■□□□ 1.1
TRIM28-202ENST00000341753 MAGEE1Q9HCI5 957 aa21.95■■□□□ 1.1
TRIM28-202ENST00000341753 ANKMY1Q9P2S6 941 aa21.95■■□□□ 1.1
TRIM28-202ENST00000341753 TTC34A8MYJ7 566 aa21.95■■□□□ 1.1
TRIM28-202ENST00000341753 CYP11A1P05108 521 aa21.95■■□□□ 1.1
TRIM28-202ENST00000341753 HMGCS1Q01581 520 aa21.95■■□□□ 1.1
TRIM28-202ENST00000341753 IRF5Q13568 498 aa21.95■■□□□ 1.1
TRIM28-202ENST00000341753 VARS2Q5ST30 1063 aaKnown RBP21.95■■□□□ 1.1
TRIM28-202ENST00000341753 YIPF6Q96EC8 236 aa21.95■■□□□ 1.1
TRIM28-202ENST00000341753 RPRD1AQ96P16 312 aaPredicted RBP21.95■■□□□ 1.1
TRIM28-202ENST00000341753 ZNF382Q96SR6 550 aa21.95■■□□□ 1.1
TRIM28-202ENST00000341753 FARSBQ9NSD9 589 aaKnown RBP21.95■■□□□ 1.1
TRIM28-202ENST00000341753 A0A0U1RQF3 1178 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 KLK8O60259 260 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 GSNP06396 782 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 CD40LGP29965 261 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 CLCA4Q14CN2 919 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 MAPKAPK3Q16644 382 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 DEPDC1Q5TB30 811 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 MILR1Q7Z6M3 343 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 CYP4Z1Q86W10 505 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 ADHFE1Q8IWW8 467 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 UBE2FQ969M7 185 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 CCDC115Q96NT0 180 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 C1QTNF3Q9BXJ4 246 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 ATP11BQ9Y2G3 1177 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 PRG3Q9Y2Y8 225 aaPredicted RBP21.94■■□□□ 1.1
TRIM28-202ENST00000341753 ORC6Q9Y5N6 252 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 DIRAS1O95057 198 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 B3GALT4O96024 378 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 ELNP15502 786 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 OR1E1P30953 314 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 GRK4P32298 578 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 SERPINB10P48595 397 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 ILF2Q12905 390 aaKnown RBP21.94■■□□□ 1.1
TRIM28-202ENST00000341753 GLT6D1Q7Z4J2 308 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 GOLGA7Q7Z5G4 137 aa21.94■■□□□ 1.1
TRIM28-202ENST00000341753 NKAPQ8N5F7 415 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms