RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 PYCR2Q96C36 320 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 MARK4Q96L34 752 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 XKR8Q9H6D3 395 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 FAM155BO75949 473 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 PDHA1P08559 390 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 CLDN10P78369 228 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 CUZD1Q86UP6 607 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 AGGF1Q8N302 714 aaeCLIP12.57□□□□□ -0.4
LIN54-201ENST00000340417 OR9A1PQ8NGU1 263 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 ASB16Q96NS5 453 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 TSGA13Q96PP4 275 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 OR52E6Q96RD3 313 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 ZNF607Q96SK3 696 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 APOOQ9BUR5 198 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 NOL6Q9H6R4 1146 aaKnown RBP12.57□□□□□ -0.4
LIN54-201ENST00000340417 LRRC4CQ9HCJ2 640 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 MUTYHQ9UIF7 546 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 RAP2CQ9Y3L5 183 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 EPOP01588 193 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 F11P03951 625 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 VSX2P58304 361 aaPredicted RBP12.57□□□□□ -0.4
LIN54-201ENST00000340417 ZNF460Q14592 562 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 DRICH1Q6PGQ1 229 aaPredicted RBP12.57□□□□□ -0.4
LIN54-201ENST00000340417 ARCQ7LC44 396 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 WDTC1Q8N5D0 677 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 SPOCK2Q92563 424 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 RIT1Q92963 219 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 C1QTNF1Q9BXJ1 281 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 MVB12BQ9H7P6 319 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 NLE1Q9NVX2 485 aaPredicted RBP12.57□□□□□ -0.4
LIN54-201ENST00000340417 SIPA1L3O60292 1781 aaPredicted RBP12.57□□□□□ -0.4
LIN54-201ENST00000340417 PDE9AO76083 593 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 RPL4P36578 427 aaKnown RBP12.57□□□□□ -0.4
LIN54-201ENST00000340417 SEC24CP53992 1094 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 AP1S2P56377 157 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 ZNF549Q6P9A3 640 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 FAM92BQ6ZTR7 304 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 UBR7Q8N806 425 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 KYQ8NBH2 561 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 LMO3Q8TAP4 145 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 TAGLN3Q9UI15 199 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 TRAF6Q9Y4K3 522 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 ATP6AP2A0A1C7CYW4 349 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 M0R3G1 203 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 RRP8O43159 456 aaKnown RBP12.57□□□□□ -0.4
LIN54-201ENST00000340417 ATP6AP2O75787 350 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 FAM98BQ52LJ0 330 aaKnown RBP12.57□□□□□ -0.4
LIN54-201ENST00000340417 MMABQ96EY8 250 aaPredicted RBP12.57□□□□□ -0.4
LIN54-201ENST00000340417 EFCAB11Q9BUY7 163 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 FOXQ1Q9C009 403 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 FANCFQ9NPI8 374 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 DOCK1Q14185 1865 aa12.57□□□□□ -0.4
LIN54-201ENST00000340417 CFAP73A6NFT4 308 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 SAP18O00422 153 aaKnown RBP12.56□□□□□ -0.4
LIN54-201ENST00000340417 CACNA2D1P54289 1103 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 CLCQ05315 142 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 ZNF844Q08AG5 666 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 NAT6Q93015 286 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 GFRA2O00451 464 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 CHRM1P11229 460 aaPredicted RBP12.56□□□□□ -0.4
LIN54-201ENST00000340417 MAGEA9P43362 315 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 CSNK1EP49674 416 aaKnown RBP12.56□□□□□ -0.4
LIN54-201ENST00000340417 AFF3P51826 1226 aaKnown RBP12.56□□□□□ -0.4
LIN54-201ENST00000340417 NEK2P51955 445 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 PAQR3Q6TCH7 311 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 MTDHQ86UE4 582 aaKnown RBP12.56□□□□□ -0.4
LIN54-201ENST00000340417 RGMAQ96B86 450 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 C17orf62Q9BQA9 187 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 GAREM1Q9H706 876 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 SLC9A8Q9Y2E8 581 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 OR2B3O76000 313 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 PRR5P85299 388 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 SMYD5Q6GMV2 418 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 DTX3LQ8TDB6 740 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 SLC13A3Q8WWT9 602 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 TIMM22Q9Y584 194 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 KLHL33A6NCF5 533 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 FBLP22087 321 aaKnown RBP12.56□□□□□ -0.4
LIN54-201ENST00000340417 PRKCHP24723 683 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 ATP5A1P25705 553 aaKnown RBP12.56□□□□□ -0.4
LIN54-201ENST00000340417 ITGA3P26006 1051 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 P2RY2P41231 377 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 TRIM71Q2Q1W2 868 aaKnown RBP12.56□□□□□ -0.4
LIN54-201ENST00000340417 FSTL4Q6MZW2 842 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 MBOAT1Q6ZNC8 495 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 SLC44A1Q8WWI5 657 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 SEPHS2Q99611 448 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 SMAD5Q99717 465 aaKnown RBP12.56□□□□□ -0.4
LIN54-201ENST00000340417 KCNN2Q9H2S1 579 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 K7EPI3 171 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 OAS1P00973 400 aaKnown RBP12.56□□□□□ -0.4
LIN54-201ENST00000340417 HSPB3Q12988 150 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 GCNT7Q6ZNI0 430 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 NUDT13Q86X67 352 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 ANKZF1Q9H8Y5 726 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 SCN3BQ9NY72 215 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 SLC2A6Q9UGQ3 507 aa12.56□□□□□ -0.4
LIN54-201ENST00000340417 LEF1Q9UJU2 399 aaPredicted RBP12.56□□□□□ -0.4
LIN54-201ENST00000340417 TRAPPC6AO75865 159 aa12.55□□□□□ -0.4
LIN54-201ENST00000340417 TARSP26639 723 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms