RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 HGH1Q9BTY7 390 aa14.83□□□□□ -0.04
PRKN-201ENST00000338468 TFB2MQ9H5Q4 396 aaKnown RBP14.83□□□□□ -0.04
PRKN-201ENST00000338468 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.83□□□□□ -0.04
PRKN-201ENST00000338468 ASIC3Q9UHC3 531 aa14.83□□□□□ -0.04
PRKN-201ENST00000338468 PIEZO2Q9H5I5 2752 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 MAGEB16A2A368 324 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 TLCD2A6NGC4 264 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 STMND1H3BQB6 276 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 K7ENP7 123 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 BTN3A1O00481 513 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 NDUFS3O75489 264 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 SLCO2B1O94956 709 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 WISP1O95388 367 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 F7P08709 466 aaPredicted RBP14.82□□□□□ -0.04
PRKN-201ENST00000338468 KCNAB1Q14722 419 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 MSS51Q4VC12 460 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 SYTL3Q4VX76 610 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 ZNF789Q5FWF6 425 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 DNTTIP2Q5QJE6 756 aaKnown RBP14.82□□□□□ -0.04
PRKN-201ENST00000338468 MRNIPQ6NTE8 343 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 NEPROQ6NW34 567 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 ZNF449Q6P9G9 518 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 INO80CQ6PI98 192 aaPredicted RBP14.82□□□□□ -0.04
PRKN-201ENST00000338468 FBXO38Q6PIJ6 1188 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 CEACAM20Q6UY09 585 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 TIPARPQ7Z3E1 657 aaKnown RBP14.82□□□□□ -0.04
PRKN-201ENST00000338468 VASH2Q86V25 355 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 CILP2Q8IUL8 1156 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 ADGRF3Q8IZF5 1079 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 UBXN4Q92575 508 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 NKD1Q969G9 470 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 ZNF669Q96BR6 464 aaPredicted RBP14.82□□□□□ -0.04
PRKN-201ENST00000338468 TEFMQ96QE5 360 aaKnown RBP14.82□□□□□ -0.04
PRKN-201ENST00000338468 CCNL2Q96S94 520 aaPredicted RBP14.82□□□□□ -0.04
PRKN-201ENST00000338468 CD180Q99467 661 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 TWSG1Q9GZX9 223 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 SRMSQ9H3Y6 488 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 XKR8Q9H6D3 395 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 SAMD15Q9P1V8 674 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 PILRAQ9UKJ1 303 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 POMT2Q9UKY4 750 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 ICKQ9UPZ9 632 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 ASF1AQ9Y294 204 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 RPS6KL1Q9Y6S9 549 aa14.82□□□□□ -0.04
PRKN-201ENST00000338468 POLR1CO15160 346 aaPredicted RBP14.81□□□□□ -0.04
PRKN-201ENST00000338468 TP73O15350 636 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 BANF1O75531 89 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 USP1O94782 785 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 S1PR4O95977 384 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 FOLR1P15328 257 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 ZNF28P17035 718 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 OGNP20774 298 aaKnown RBP14.81□□□□□ -0.04
PRKN-201ENST00000338468 EIF3BP55884 814 aaKnown RBP14.81□□□□□ -0.04
PRKN-201ENST00000338468 PLOD1Q02809 727 aaPredicted RBP14.81□□□□□ -0.04
PRKN-201ENST00000338468 FOXM1Q08050 763 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 HSPA14Q0VDF9 509 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 DHX34Q14147 1143 aaKnown RBP14.81□□□□□ -0.04
PRKN-201ENST00000338468 IZUMO3Q5VZ72 239 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 PTRHD1Q6GMV3 140 aaKnown RBP14.81□□□□□ -0.04
PRKN-201ENST00000338468 PRICKLE2Q7Z3G6 844 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 LRRC6Q86X45 466 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 UNC5BQ8IZJ1 945 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 OTUD6BQ8N6M0 293 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 OR5K2Q8NHB8 316 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 ASZ1Q8WWH4 475 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 RNF31Q96EP0 1072 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 OR6C1Q96RD1 312 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 TCF12Q99081 682 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 ZPBPQ9BS86 351 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 TRIM51Q9BSJ1 452 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 GNPTGQ9UJJ9 305 aa14.81□□□□□ -0.04
PRKN-201ENST00000338468 TMEM184BQ9Y519 407 aaPredicted RBP14.81□□□□□ -0.04
PRKN-201ENST00000338468 UBA6A0AVT1 1052 aaPredicted RBP14.8□□□□□ -0.04
PRKN-201ENST00000338468 F8W8V4 182 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 TTI1O43156 1089 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 RAD1O60671 282 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 DLGAP3O95886 979 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 EBLN1P0CF75 366 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 PAMP19021 973 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 FMO4P31512 558 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 ADARP55265 1226 aaKnown RBP14.8□□□□□ -0.04
PRKN-201ENST00000338468 DR1Q01658 176 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 DHX9Q08211 1270 aaKnown RBP14.8□□□□□ -0.04
PRKN-201ENST00000338468 SYDE1Q6ZW31 735 aaPredicted RBP14.8□□□□□ -0.04
PRKN-201ENST00000338468 SDCCAG8Q86SQ7 713 aaPredicted RBP14.8□□□□□ -0.04
PRKN-201ENST00000338468 HOOK3Q86VS8 718 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 AMIGO1Q86WK6 493 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 KMT5CQ86Y97 462 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 IGDCC3Q8IVU1 814 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 SPNS2Q8IVW8 549 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 DENND6AQ8IWF6 608 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 TBC1D21Q8IYX1 336 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 D2HGDHQ8N465 521 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 FLVCR1-AS1Q8TAF5 88 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 PWWP2AQ96N64 755 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 MENTQ9BUN1 341 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 TSSK1BQ9BXA7 367 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 TRIT1Q9H3H1 467 aaKnown RBP14.8□□□□□ -0.04
PRKN-201ENST00000338468 PLAC1Q9HBJ0 212 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 GALPQ9UBC7 116 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms