RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 HSD17B3P37058 310 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 RAB10P61026 200 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 PRKG2Q13237 762 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 SQSTM1Q13501 440 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 GPR18Q14330 331 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 PLCL1Q15111 1095 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 AMZ1Q400G9 498 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 MROH9Q5TGP6 573 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 ARMC6Q6NXE6 501 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 DUS1LQ6P1R4 473 aaKnown RBP11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 CYHR1Q6ZMK1 362 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 RAPH1Q70E73 1250 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 USP53Q70EK8 1073 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 DGLUCYQ7Z3D6 616 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 SPRED1Q7Z699 444 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 CCDC91Q7Z6B0 441 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 PIM3Q86V86 326 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 RAB42Q8N4Z0 105 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 OR5AR1Q8NGP9 310 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 OR5K2Q8NHB8 316 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 GIMAP7Q8NHV1 300 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 LCN9Q8WX39 176 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 ASB11Q8WXH4 323 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 RAD51AP1Q96B01 352 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 LINGO1Q96FE5 620 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 PDLIM5Q96HC4 596 aaKnown RBP11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 GFM1Q96RP9 751 aaKnown RBP11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 DPYSL5Q9BPU6 564 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 TRIM54Q9BYV2 358 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 SRMSQ9H3Y6 488 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 TFB2MQ9H5Q4 396 aaKnown RBP11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 SYNDIG1Q9H7V2 258 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 GPAMQ9HCL2 828 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 TOR4AQ9NXH8 423 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 LNPEPQ9UIQ6 1025 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 TSR3Q9UJK0 312 aaKnown RBP11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 TLK1Q9UKI8 766 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 ZNF292O60281 2723 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 ASCC3Q8N3C0 2202 aaKnown RBP11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 PLXNB3Q9ULL4 1909 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 IGHV1OR21-1A0A087WYE8 117 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 IQANK1A0A1B0GTG1 560 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 PABPN1LA6NDY0 278 aaKnown RBP11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 TMX2-CTNND1H3BSU7 103 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 SLC16A5O15375 505 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 DUX1O43812 170 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 UBXN7O94888 489 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 C1orf105O95561 183 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 PROS1P07225 676 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 C8GP07360 202 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 SNRPAP09012 282 aaKnown RBP11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 HIST1H2AGP0C0S8 130 aaPredicted RBP11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 HIST1H2ADP20671 130 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 CD1CP29017 333 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 TYK2P29597 1187 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 IFFO1Q0D2I5 559 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 SPIDRQ14159 915 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 ADGRD1Q6QNK2 874 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 DHRS13Q6UX07 377 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 ZNF761Q86XN6 746 aaPredicted RBP11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 CEP97Q8IW35 865 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 DCUN1D3Q8IWE4 304 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 OR4E2Q8NGC2 313 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 MCOLN3Q8TDD5 553 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 DCAKDQ8WVC6 231 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 ADAMTS14Q8WXS8 1223 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 ANKRD7Q92527 254 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 NCSTNQ92542 709 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 MTBPQ96DY7 904 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 HIST1H2AHQ96KK5 128 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 HIST1H2AJQ99878 128 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 H2AFJQ9BTM1 129 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 HGH1Q9BTY7 390 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 TBC1D10AQ9BXI6 508 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 EPB41L4BQ9H329 900 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 CAB39LQ9H9S4 337 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 ACOT9Q9Y305 439 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 NFS1Q9Y697 457 aa11.59□□□□□ -0.55
SPTLC1-202ENST00000337841 FAM221BA6H8Z2 402 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 GFYI3L273 518 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 PSIP1O75475 530 aaKnown RBP11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 TCEA3O75764 348 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 DKK1O94907 266 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 CPNE6O95741 557 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 MT-CO3P00414 261 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 JUPP14923 745 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 TYRP1P17643 537 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 CYP2A7P20853 494 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 SHMT2P34897 504 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 HSD17B2P37059 387 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 SLC26A3P40879 764 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 SERPINB8P50452 374 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 PRKAA1Q13131 559 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 BMPR2Q13873 1038 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 NKAIN2Q5VXU1 208 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 RBM44Q6ZP01 1051 aaKnown RBP11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 UBE2R2Q712K3 238 aaPredicted RBP11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 PIWIL4Q7Z3Z4 852 aaKnown RBP11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 TBC1D1Q86TI0 1168 aaPredicted RBP11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 AMIGO1Q86WK6 493 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms