RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 MAP3K7O43318 606 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 RFPL1O75677 317 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 KLK3P07288 261 aaPredicted RBP13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 OR56A5P0C7T3 313 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 SHMT2P34897 504 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 RORAP35398 523 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 PREPP48147 710 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 ARCN1P48444 511 aaKnown RBP13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 KLRB1Q12918 225 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 GPS2Q13227 327 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 ZNF789Q5FWF6 425 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 PLEKHS1Q5SXH7 462 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 TSTD2Q5T7W7 516 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 MEI1Q5TIA1 1274 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 C4orf22Q6V702 233 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 PTRH1Q86Y79 214 aaKnown RBP13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 DNAAF3Q8N9W5 541 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 SLC38A9Q8NBW4 561 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 OR5K2Q8NHB8 316 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 PPM1MQ96MI6 270 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 DPH2Q9BQC3 489 aaPredicted RBP13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 TLR10Q9BXR5 811 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 TRIM4Q9C037 500 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 EPN3Q9H201 632 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 AKIRIN1Q9H9L7 192 aaPredicted RBP13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 EIF2B3Q9NR50 452 aaKnown RBP13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 PIH1D1Q9NWS0 290 aaKnown RBP13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 OR6C2Q9NZP2 312 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 PAK5Q9P286 719 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 FARSAQ9Y285 508 aaKnown RBP13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 MAN2B2Q9Y2E5 1009 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 ZKSCAN5Q9Y2L8 839 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 PCM1Q15154 2024 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 NUP210LQ5VU65 1888 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 FLNCQ14315 2725 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 PIPSLA2A3N6 862 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 CCDC162PA2VCL2 907 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 PYCARD-AS1I3L0S3 204 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 MEN1O00255 615 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 ARHGAP6O43182 974 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 KDM1AO60341 852 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 GOT2P00505 430 aaKnown RBP13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 ST6GAL1P15907 406 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 PPARGP37231 505 aaPredicted RBP13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 ABRQ12979 859 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 FAM199XQ6PEV8 388 aaPredicted RBP13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 FBXO38Q6PIJ6 1188 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 SPESP1Q6UW49 350 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 PPP1R21Q6ZMI0 780 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 SPC24Q8NBT2 197 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 PHC3Q8NDX5 983 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 OR4L1Q8NH43 312 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 ELMO1Q92556 727 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 HGH1Q9BTY7 390 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 NLNQ9BYT8 704 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 ZNF71Q9NQZ8 489 aaPredicted RBP13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 ACTR10Q9NZ32 417 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 SERTAD3Q9UJW9 196 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 GUCA1BQ9UMX6 200 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 ICKQ9UPZ9 632 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 ZNF148Q9UQR1 794 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 ASF1AQ9Y294 204 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 DRG1Q9Y295 367 aaKnown RBP13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 TP53TG5Q9Y2B4 290 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 TCAF1Q9Y4C2 921 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 DOPEY2Q9Y3R5 2298 aa13.15□□□□□ -0.3
GTF3C6-201ENST00000329970 RELNP78509 3460 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 OR51F1A6NGY5 319 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 TMEM150CB9EJG8 249 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 BHMG1C9JSJ3 638 aaPredicted RBP13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 E7EVH7 732 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 H3BMH7 237 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 AP3B1O00203 1094 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 IFNB1P01574 187 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 HBQ1P09105 142 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 GRIA1P42261 906 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 ITGA1P56199 1179 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 SIX1Q15475 284 aaPredicted RBP13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 CCNG2Q16589 344 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 CCDC38Q502W7 563 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 DNAJC21Q5F1R6 531 aaKnown RBP13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 MICALCLQ6ZW33 695 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 ZNF534Q76KX8 674 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 TMEM135Q86UB9 458 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 OR5AR1Q8NGP9 310 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 OR1L3Q8NH93 324 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 FLVCR1-AS1Q8TAF5 88 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 ADAMTS17Q8TE56 1095 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 MR1Q95460 341 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 HDAC10Q969S8 669 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 RNF31Q96EP0 1072 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 TCTN2Q96GX1 697 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 RUFY1Q96T51 708 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 CARD6Q9BX69 1037 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 TSSK1BQ9BXA7 367 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 AP1M1Q9BXS5 423 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 CHST8Q9H2A9 424 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 MLXIPLQ9NP71 852 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 RAB6BQ9NRW1 208 aa13.14□□□□□ -0.31
GTF3C6-201ENST00000329970 PCMTD2Q9NV79 361 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms