RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 GPBAR1Q8TDU6 330 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 UBTD2Q8WUN7 234 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 PHF21BQ96EK2 531 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 GATA5Q9BWX5 397 aaPredicted RBP10□□□□□ -0.81
VIPAS39-201ENST00000327028 TCEAL2Q9H3H9 227 aaPredicted RBP10□□□□□ -0.81
VIPAS39-201ENST00000327028 WASH6PQ9NQA3 447 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 SUSD2Q9UGT4 822 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 PSMD13Q9UNM6 376 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 FANCMQ8IYD8 2048 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 ANKRD12Q6UB98 2062 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 NCF1BA6NI72 391 aaPredicted RBP9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 NCF1CA8MVU1 366 aaPredicted RBP9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 TMEM114B3SHH9 223 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 C1orf105O95561 183 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 CSF2P04141 144 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 RPN2P04844 631 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 HIST1H2AGP0C0S8 130 aaPredicted RBP9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 NCF1P14598 390 aaPredicted RBP9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 GNSP15586 552 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 HIST1H2ADP20671 130 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 AK4P27144 223 aaPredicted RBP9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 RPIAP49247 311 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 HERVK_113P63132 956 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 CBX1P83916 185 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 BST1Q10588 318 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 UAP1L1Q3KQV9 507 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 PEAR1Q5VY43 1037 aaPredicted RBP9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 CES4AQ5XG92 561 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 SULT1C3Q6IMI6 304 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 TCAIMQ8N3R3 496 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 SPDYE1Q8NFV5 336 aaPredicted RBP9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 RHBDF1Q96CC6 855 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 HIST1H2AHQ96KK5 128 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 ZNF317Q96PQ6 595 aaPredicted RBP9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 HIST1H2AJQ99878 128 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 EGFL8Q99944 293 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 H2AFJQ9BTM1 129 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 C1QTNF3Q9BXJ4 246 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 ERVK-6Q9BXR3 956 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 GSDMCQ9BYG8 508 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 DNAJC28Q9NX36 388 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 ARL15Q9NXU5 204 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 APOBEC3BQ9UH17 382 aaKnown RBP9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 PILRBQ9UKJ0 227 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 PCOLCE2Q9UKZ9 415 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 WDR37Q9Y2I8 494 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 PDZK1P1A8MUH7 402 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 GALR2O43603 387 aaPredicted RBP9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 GUCA1CO95843 209 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 RPS17P08708 135 aaKnown RBP9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 ANXA5P08758 320 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 JUNDP17535 347 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 IMPDH1P20839 514 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 RPL10P27635 214 aaKnown RBP9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 SERPINB5P36952 375 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 ACTR1BP42025 376 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 DPP6P42658 865 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 CSNK1EP49674 416 aaKnown RBP9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 ACTR1AP61163 376 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 NAA20P61599 178 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 STX3Q13277 289 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 ZNF678Q5SXM1 525 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 ABRAXAS1Q6UWZ7 409 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 MBOAT1Q6ZNC8 495 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 DCUN1D3Q8IWE4 304 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 CCL4L1Q8NHW4 92 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 TFGQ92734 400 aaPredicted RBP9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 CHMP6Q96FZ7 201 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 C12orf66Q96MD2 445 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 LRRC61Q9BV99 259 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 PRDM8Q9NQV8 689 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 TBC1D29Q9UFV1 150 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 PTBP2Q9UKA9 531 aaKnown RBP9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 ASF1AQ9Y294 204 aa9.99□□□□□ -0.81
VIPAS39-201ENST00000327028 A6NCN8 305 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 PRR33A8MZF0 331 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 MYO1CO00159 1063 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 NPHS1O60500 1241 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 SNNO75324 88 aaPredicted RBP9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 CTSEP14091 401 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 EEF1DP29692 281 aaKnown RBP9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 HOXD12P35452 270 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 HALP42357 657 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 HNMTP50135 292 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 NAGLUP54802 743 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 RCN2Q14257 317 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 ZNF542PQ5EBM4 170 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 SLC30A9Q6PML9 568 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 CCNYL1Q8N7R7 359 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 OR5K2Q8NHB8 316 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 MAGEC3Q8TD91 643 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 FBXL8Q96CD0 374 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 CCDC138Q96M89 665 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 INSM2Q96T92 566 aaPredicted RBP9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 TMEM79Q9BSE2 394 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 TRIT1Q9H3H1 467 aaKnown RBP9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 WWOXQ9NZC7 414 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 TNPO3Q9Y5L0 923 aaKnown RBP9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 A0A1B0GVT2 93 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 GMNCA6NCL1 334 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms