RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 ADAMTS16Q8TE57 1224 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 CYGBQ8WWM9 190 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 SUV39H2Q9H5I1 410 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 PIF1Q9H611 641 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 GORASP2Q9H8Y8 452 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 CLDN9O95484 217 aa21.89■■□□□ 1.1
PNKP-201ENST00000322344 GNAO1P09471 354 aa21.89■■□□□ 1.1
PNKP-201ENST00000322344 SOX11P35716 441 aa21.89■■□□□ 1.1
PNKP-201ENST00000322344 CDK9P50750 372 aaKnown RBP21.89■■□□□ 1.1
PNKP-201ENST00000322344 TLE2Q04725 743 aa21.89■■□□□ 1.1
PNKP-201ENST00000322344 ARHGEF7Q14155 803 aa21.89■■□□□ 1.1
PNKP-201ENST00000322344 LRRC66Q68CR7 880 aa21.89■■□□□ 1.1
PNKP-201ENST00000322344 ABRAXAS1Q6UWZ7 409 aa21.89■■□□□ 1.1
PNKP-201ENST00000322344 PATL1Q86TB9 770 aaKnown RBP21.89■■□□□ 1.1
PNKP-201ENST00000322344 LIX1Q8N485 282 aa21.89■■□□□ 1.1
PNKP-201ENST00000322344 ZNF296Q8WUU4 475 aaPredicted RBP21.89■■□□□ 1.1
PNKP-201ENST00000322344 GTF2H4Q92759 462 aa21.89■■□□□ 1.1
PNKP-201ENST00000322344 HIC2Q96JB3 615 aa21.89■■□□□ 1.1
PNKP-201ENST00000322344 VPS50Q96JG6 964 aa21.89■■□□□ 1.1
PNKP-201ENST00000322344 ZNF583Q96ND8 569 aa21.89■■□□□ 1.1
PNKP-201ENST00000322344 MCCC1Q96RQ3 725 aaPredicted RBP21.89■■□□□ 1.1
PNKP-201ENST00000322344 SLC32A1Q9H598 525 aa21.89■■□□□ 1.1
PNKP-201ENST00000322344 C1orf109Q9NX04 203 aa21.89■■□□□ 1.1
PNKP-201ENST00000322344 HS3ST2Q9Y278 367 aa21.89■■□□□ 1.1
PNKP-201ENST00000322344 NEUROG3Q9Y4Z2 214 aa21.89■■□□□ 1.1
PNKP-201ENST00000322344 ABHD14A-ACY1A0A1B0GW23 586 aa21.89■■□□□ 1.09
PNKP-201ENST00000322344 SEC22BO75396 215 aa21.89■■□□□ 1.09
PNKP-201ENST00000322344 OR56A5P0C7T3 313 aa21.89■■□□□ 1.09
PNKP-201ENST00000322344 BMP1P13497 986 aa21.89■■□□□ 1.09
PNKP-201ENST00000322344 PFKLP17858 780 aa21.89■■□□□ 1.09
PNKP-201ENST00000322344 GGT5P36269 586 aa21.89■■□□□ 1.09
PNKP-201ENST00000322344 PTGR1Q14914 329 aa21.89■■□□□ 1.09
PNKP-201ENST00000322344 LRRC70Q7Z2Q7 622 aa21.89■■□□□ 1.09
PNKP-201ENST00000322344 TMC8Q8IU68 726 aa21.89■■□□□ 1.09
PNKP-201ENST00000322344 RGL4Q8IZJ4 473 aa21.89■■□□□ 1.09
PNKP-201ENST00000322344 ADGRG2Q8IZP9 1017 aa21.89■■□□□ 1.09
PNKP-201ENST00000322344 OR2T12Q8NG77 320 aa21.89■■□□□ 1.09
PNKP-201ENST00000322344 LMLNQ96KR4 655 aa21.89■■□□□ 1.09
PNKP-201ENST00000322344 RPL10LQ96L21 214 aaKnown RBP21.89■■□□□ 1.09
PNKP-201ENST00000322344 UGT2B28Q9BY64 529 aa21.89■■□□□ 1.09
PNKP-201ENST00000322344 YTHDF1Q9BYJ9 559 aaKnown RBP21.89■■□□□ 1.09
PNKP-201ENST00000322344 CPEB1Q9BZB8 566 aaKnown RBP21.89■■□□□ 1.09
PNKP-201ENST00000322344 CLMPQ9H6B4 373 aa21.89■■□□□ 1.09
PNKP-201ENST00000322344 A0A1W2PQ67 120 aa21.88■■□□□ 1.09
PNKP-201ENST00000322344 A8MX80 341 aa21.88■■□□□ 1.09
PNKP-201ENST00000322344 H0YAE9 185 aa21.88■■□□□ 1.09
PNKP-201ENST00000322344 LILRB3O75022 631 aa21.88■■□□□ 1.09
PNKP-201ENST00000322344 PRSS23O95084 383 aa21.88■■□□□ 1.09
PNKP-201ENST00000322344 LRG1P02750 347 aa21.88■■□□□ 1.09
PNKP-201ENST00000322344 ESRRGP62508 458 aa21.88■■□□□ 1.09
PNKP-201ENST00000322344 HMGCS1Q01581 520 aa21.88■■□□□ 1.09
PNKP-201ENST00000322344 CHRNB3Q05901 458 aa21.88■■□□□ 1.09
PNKP-201ENST00000322344 FAM174BQ3ZCQ3 159 aa21.88■■□□□ 1.09
PNKP-201ENST00000322344 C22orf39Q6P5X5 142 aa21.88■■□□□ 1.09
PNKP-201ENST00000322344 FAM9CQ8IZT9 166 aa21.88■■□□□ 1.09
PNKP-201ENST00000322344 MAGEE2Q8TD90 523 aaPredicted RBP21.88■■□□□ 1.09
PNKP-201ENST00000322344 GPBP1L1Q9HC44 474 aaPredicted RBP21.88■■□□□ 1.09
PNKP-201ENST00000322344 VAPAQ9P0L0 249 aa21.88■■□□□ 1.09
PNKP-201ENST00000322344 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.88■■□□□ 1.09
PNKP-201ENST00000322344 IGLV3-16A0A075B6K0 115 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 DFNA5O60443 496 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 ASLP04424 464 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 C8GP07360 202 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 PPM1AP35813 382 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 RPIAP49247 311 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 CYP4F3Q08477 520 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 CYBRD1Q53TN4 286 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 OR52E4Q8NGH9 312 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 ZNF641Q96N77 438 aaPredicted RBP21.87■■□□□ 1.09
PNKP-201ENST00000322344 FARSBQ9NSD9 589 aaKnown RBP21.87■■□□□ 1.09
PNKP-201ENST00000322344 LEFTY2O00292 366 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 GSTA4O15217 222 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 PGRP06401 933 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 SPATA31D3P0C874 917 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 NFKBIAP25963 317 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 TRIM60Q495X7 471 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 GGTA1PQ4G0N0 100 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 USP39Q53GS9 565 aaKnown RBP21.87■■□□□ 1.09
PNKP-201ENST00000322344 FAM117BQ6P1L5 589 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 SPATA31D4Q6ZUB0 917 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 USP51Q70EK9 711 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 HS6ST3Q8IZP7 471 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 POP5Q969H6 163 aaKnown RBP21.87■■□□□ 1.09
PNKP-201ENST00000322344 VOPP1Q96AW1 172 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 OSBPL6Q9BZF3 934 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 CEP44Q9C0F1 390 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 ACTR8Q9H981 624 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 ARL15Q9NXU5 204 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 V9GYQ6 96 aa21.87■■□□□ 1.09
PNKP-201ENST00000322344 MPC1LP0DKB6 136 aa21.86■■□□□ 1.09
PNKP-201ENST00000322344 SLC5A2P31639 672 aa21.86■■□□□ 1.09
PNKP-201ENST00000322344 CTSOP43234 321 aaPredicted RBP21.86■■□□□ 1.09
PNKP-201ENST00000322344 ADARB1P78563 741 aaKnown RBP21.86■■□□□ 1.09
PNKP-201ENST00000322344 PTSQ03393 145 aa21.86■■□□□ 1.09
PNKP-201ENST00000322344 SGO1Q5FBB7 561 aa21.86■■□□□ 1.09
PNKP-201ENST00000322344 LPCAT2Q7L5N7 544 aa21.86■■□□□ 1.09
PNKP-201ENST00000322344 VWCEQ96DN2 955 aa21.86■■□□□ 1.09
PNKP-201ENST00000322344 SLC12A9Q9BXP2 914 aa21.86■■□□□ 1.09
PNKP-201ENST00000322344 EMILIN2Q9BXX0 1053 aa21.86■■□□□ 1.09
PNKP-201ENST00000322344 ZFP14Q9HCL3 533 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms