RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 PHACTR4Q8IZ21 702 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 SCML4Q8N228 414 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 DTWD1Q8N5C7 304 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 ZBTB2Q8N680 514 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 KCNH4Q9UQ05 1017 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 MEIS3P2A8K0S8 358 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 PER2O15055 1255 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 ACSL4O60488 711 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 CNMDO75829 334 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 SBK3P0C264 359 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 PIM1P11309 404 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 DDX5P17844 614 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 CYBRD1Q53TN4 286 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 DNAJB8Q8NHS0 232 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 FCGR1BQ92637 280 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 SLCO4A1Q96BD0 722 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 SLC2A11Q9BYW1 496 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.51□□□□□ -0.412e-6■■■■■ 51.1
DNMT3A-202ENST00000321117 RBM38Q9H0Z9 239 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 ZFYVE1Q9HBF4 777 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 GPR45Q9Y5Y3 372 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 GREB1LQ9C091 1923 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 FAM220BPB1ANY3 271 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 SLC1A7O00341 560 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 BCAS1O75363 584 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 ADAM17P78536 824 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 NFKB2Q00653 900 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 SERINC3Q13530 473 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 OR52B6Q8NGF0 335 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 IPCEF1Q8WWN9 437 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 TRIM63Q969Q1 353 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 PYURFQ96I23 114 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 C1orf74Q96LT6 269 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 NSUN3Q9H649 340 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 CLN6Q9NWW5 311 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 DUS2Q9NX74 493 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 OGDHLQ9ULD0 1010 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 SATB2Q9UPW6 733 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 ZFP37Q9Y6Q3 630 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 IQCF5A8MTL0 148 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 CHRNA1P02708 482 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 RPIAP49247 311 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 TMEM236Q5W0B7 351 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 UBE2R2Q712K3 238 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 PIWIL3Q7Z3Z3 882 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 SPRED1Q7Z699 444 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 ENKURQ8TC29 256 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 ACDQ96AP0 544 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 MYO19Q96H55 970 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 COPS8Q99627 209 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 C2orf49Q9BVC5 232 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 NMUR1Q9HB89 426 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 TEKT2Q9UIF3 430 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 TMED5Q9Y3A6 229 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 NME7Q9Y5B8 376 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 ARVCFO00192 962 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 DIRAS1O95057 198 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 CELF2O95319 508 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 IGSF6O95976 241 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 CKMP06732 381 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 CTSKP43235 329 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 GABARAPL2P60520 117 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 DUSP4Q13115 394 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 CBLBQ13191 982 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 MARCH8Q5T0T0 291 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 LYPLAL1Q5VWZ2 237 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 TMEM53Q6P2H8 277 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 C19orf18Q8NEA5 215 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 OR13J1Q8NGT2 312 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 NLE1Q9NVX2 485 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 ZNF221Q9UK13 617 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 CORO2BQ9UQ03 480 aa12.51□□□□□ -0.41
DNMT3A-202ENST00000321117 UBFD1O14562 309 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 MYL12BO14950 172 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 LSM1O15116 133 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 INMTO95050 263 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 SERPINA4P29622 427 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 DNAJA1P31689 397 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 GDF5P43026 501 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 CDH4P55283 916 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 RPS24P62847 133 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 CSNK2BP67870 215 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 MFSD4BQ5TF39 518 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 PIK3R6Q5UE93 754 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 CES5AQ6NT32 575 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 ENPP6Q6UWR7 440 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 C11orf74Q86VG3 221 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 CYP4Z1Q86W10 505 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 MFSD6LQ8IWD5 586 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 SPARTQ8N0X7 666 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 PHF10Q8WUB8 498 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 FUBP3Q96I24 572 aaKnown RBP eCLIP12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 HERC2P3Q9BVR0 1158 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 ARNT2Q9HBZ2 717 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 MIEF1Q9NQG6 463 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 SARDHQ9UL12 918 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 MAGED1Q9Y5V3 778 aaPredicted RBP12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 PEX16Q9Y5Y5 336 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 TNFRSF11BO00300 401 aa12.5□□□□□ -0.41
DNMT3A-202ENST00000321117 TFECO14948 347 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms