RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 TYSND1Q2T9J0 566 aa15.27■□□□□ 0.04
SHROOM1-201ENST00000319854 LCN8Q6JVE9 175 aa15.27■□□□□ 0.04
SHROOM1-201ENST00000319854 SPARTQ8N0X7 666 aa15.27■□□□□ 0.04
SHROOM1-201ENST00000319854 SFRP1Q8N474 314 aa15.27■□□□□ 0.04
SHROOM1-201ENST00000319854 PDPRQ8NCN5 879 aa15.27■□□□□ 0.04
SHROOM1-201ENST00000319854 SLAIN1Q8ND83 568 aa15.27■□□□□ 0.04
SHROOM1-201ENST00000319854 PDZD8Q8NEN9 1154 aa15.27■□□□□ 0.04
SHROOM1-201ENST00000319854 TRMOQ9BU70 441 aa15.27■□□□□ 0.04
SHROOM1-201ENST00000319854 KLF16Q9BXK1 252 aaPredicted RBP15.27■□□□□ 0.04
SHROOM1-201ENST00000319854 NDEL1Q9GZM8 345 aa15.27■□□□□ 0.04
SHROOM1-201ENST00000319854 CWH43Q9H720 699 aa15.27■□□□□ 0.04
SHROOM1-201ENST00000319854 SLAMF8Q9P0V8 285 aa15.27■□□□□ 0.04
SHROOM1-201ENST00000319854 ACTR3BQ9P1U1 418 aa15.27■□□□□ 0.04
SHROOM1-201ENST00000319854 NRG2O14511 850 aaPredicted RBP15.27■□□□□ 0.03
SHROOM1-201ENST00000319854 MAN1A2O60476 641 aa15.27■□□□□ 0.03
SHROOM1-201ENST00000319854 CLDN7O95471 211 aa15.27■□□□□ 0.03
SHROOM1-201ENST00000319854 F11P03951 625 aa15.27■□□□□ 0.03
SHROOM1-201ENST00000319854 FPGSQ05932 587 aa15.27■□□□□ 0.03
SHROOM1-201ENST00000319854 SMARCB1Q12824 385 aa15.27■□□□□ 0.03
SHROOM1-201ENST00000319854 MAPK11Q15759 364 aa15.27■□□□□ 0.03
SHROOM1-201ENST00000319854 RABL3Q5HYI8 236 aa15.27■□□□□ 0.03
SHROOM1-201ENST00000319854 BROXQ5VW32 411 aa15.27■□□□□ 0.03
SHROOM1-201ENST00000319854 VASH1Q7L8A9 365 aaPredicted RBP15.27■□□□□ 0.03
SHROOM1-201ENST00000319854 ANKRD13BQ86YJ7 626 aa15.27■□□□□ 0.03
SHROOM1-201ENST00000319854 HS6ST3Q8IZP7 471 aa15.27■□□□□ 0.03
SHROOM1-201ENST00000319854 MIER2Q8N344 545 aa15.27■□□□□ 0.03
SHROOM1-201ENST00000319854 CD200R1Q8TD46 325 aa15.27■□□□□ 0.03
SHROOM1-201ENST00000319854 CDK5RAP1Q96SZ6 601 aaKnown RBP15.27■□□□□ 0.03
SHROOM1-201ENST00000319854 CIPCQ9C0C6 399 aa15.27■□□□□ 0.03
SHROOM1-201ENST00000319854 TFB2MQ9H5Q4 396 aaKnown RBP15.27■□□□□ 0.03
SHROOM1-201ENST00000319854 SCHIP1Q9P0W5 487 aaPredicted RBP15.27■□□□□ 0.03
SHROOM1-201ENST00000319854 ZNF225Q9UK10 706 aa15.27■□□□□ 0.03
SHROOM1-201ENST00000319854 LCHNA4D1U4 455 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 PSMD11O00231 422 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 FFAR3O14843 346 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 GPR42O15529 346 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 PRAMEF1O95521 474 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 ACRP10323 421 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 TCF3P15923 654 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 DMPKQ09013 629 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 IMPG1Q17R60 797 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 UTS2BQ765I0 119 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 TMEM150AQ86TG1 271 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 SKA2Q8WVK7 121 aaPredicted RBP15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 PLD4Q96BZ4 506 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 TMEM175Q9BSA9 504 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 C17orf80Q9BSJ5 609 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 ASB8Q9H765 288 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 INTS10Q9NVR2 710 aaKnown RBP15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 ANKMY1Q9P2S6 941 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 ANKRD36A6QL64 1941 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 TCRBV5S2A0A599 114 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 ABCB7O75027 752 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 GGT5P36269 586 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 TTPAP49638 278 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 UFM1P61960 85 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 CRIPAKQ8N1N5 446 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 TMEM74Q96NL1 305 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 PRM3Q9NNZ6 103 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 KLHL3Q9UH77 587 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 GOLGA4Q13439 2230 aaKnown RBP15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 SZT2Q5T011 3432 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 TYW5A2RUC4 315 aaKnown RBP15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 PITPNM1O00562 1244 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 URODP06132 367 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 UGT2B4P06133 528 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 CLPPQ16740 277 aaPredicted RBP15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 TSPAN33Q86UF1 283 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 BBS7Q8IWZ6 715 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 PARP8Q8N3A8 854 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 FNDC5Q8NAU1 212 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 C2orf15Q8WU43 125 aaKnown RBP15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 EFHD2Q96C19 240 aaPredicted RBP15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 ROPN1LQ96C74 230 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 DHRS1Q96LJ7 313 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 EGFL8Q99944 293 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 YTHDF1Q9BYJ9 559 aaKnown RBP15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 DERL2Q9GZP9 239 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 CFAP97Q9P2B7 532 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 LHX3Q9UBR4 397 aa15.26■□□□□ 0.03
SHROOM1-201ENST00000319854 KRT87PA6NCN2 255 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 GMNNO75496 209 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 INMTO95050 263 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 HSD17B1P14061 328 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 LBPP18428 481 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 CRHBPP24387 322 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 ALDH4A1P30038 563 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 NR4A2P43354 598 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 HTR6P50406 440 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 MBOAT1Q6ZNC8 495 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 SLC22A16Q86VW1 577 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 CLIP4Q8N3C7 705 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 LKAAEAR1Q8TD35 194 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 ING2Q9H160 280 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 NSUN3Q9H649 340 aaKnown RBP15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 NDUFAF1Q9Y375 327 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 A0A1W2PRU2 124 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 TSPAN12O95859 305 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 SLC26A3P40879 764 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms