RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 RETREG1Q9H6L5 497 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 TMPRSS4Q9NRS4 437 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 OPTCQ9UBM4 332 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 KLHL21Q9UJP4 597 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 MYH11P35749 1972 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 CAPN5O15484 640 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-201ENST00000316707 NDUFB5O43674 189 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 CHRNB1P11230 501 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 S100A3P33764 101 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 CDK10Q15131 360 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 KDM4DQ6B0I6 523 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 ZNF517Q6ZMY9 492 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-201ENST00000316707 ZNF605Q86T29 641 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 CCDC28AQ8IWP9 274 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 PGBD3Q8N328 593 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 OR6F1Q8NGZ6 308 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 RHBDF1Q96CC6 855 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 CDADC1Q9BWV3 514 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 REXO4Q9GZR2 422 aaKnown RBP4.69□□□□□ -1.66
PTPN13-201ENST00000316707 ARIH1Q9Y4X5 557 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-201ENST00000316707 A0A096LPI6 279 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 LOC285095A0A1B0GVY8 99 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 ASPDHA6ND91 283 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 PRMT3O60678 531 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 PGLSO95336 258 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 G6PDP11413 515 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 GALNT3Q14435 633 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 ZNF235Q14590 738 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 RBBP7Q16576 425 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 C5orf22Q49AR2 442 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 LRIF1Q5T3J3 769 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 TMEM236Q5W0B7 351 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 TRAF7Q6Q0C0 670 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 ALKAL1Q6UXT8 129 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 RNF19BQ6ZMZ0 732 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 FAM92BQ6ZTR7 304 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 AHSA2Q719I0 299 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 MILR1Q7Z6M3 343 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 CCDC190Q86UF4 302 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 METTL23Q86XA0 190 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 UBQLNLQ8IYU4 475 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 PARP16Q8N5Y8 322 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 CNIH3Q8TBE1 160 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 FAM110BQ8TC76 370 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 PDLIM5Q96HC4 596 aaKnown RBP4.69□□□□□ -1.66
PTPN13-201ENST00000316707 CLSTN3Q9BQT9 956 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 SLC22A4Q9H015 551 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 TAS2R9Q9NYW1 312 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 VAPAQ9P0L0 249 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 SPASTQ9UBP0 616 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 MAGED1Q9Y5V3 778 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-201ENST00000316707 PPP6CO00743 305 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PER2O15055 1255 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ADAMDEC1O15204 470 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 TLL1O43897 1013 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 OR4F21O95013 312 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 FABP3P05413 133 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PGRP06401 933 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 CAPN1P07384 714 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 SLC2A4P14672 509 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PRKCAP17252 672 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 MASP1P48740 699 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 NDUFV1P49821 464 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 CDKN2DP55273 166 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 MAP3K7CLP57077 242 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 IL10RBQ08334 325 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 NPRL3Q12980 569 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 CAMK2GQ13555 558 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 SUZ12Q15022 739 aaKnown RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ARHGEF6Q15052 776 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 NBPF12Q5TAG4 269 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 AFMIDQ63HM1 303 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 CERS6Q6ZMG9 384 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PAQR9Q6ZVX9 377 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 RPS27LQ71UM5 84 aaKnown RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ZNF367Q7RTV3 350 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 SYTL1Q8IYJ3 562 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 SPERTQ8NA61 448 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ITCHQ96J02 903 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 MAGEB10Q96LZ2 347 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 CSNK1G1Q9HCP0 422 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 NT5MQ9NPB1 228 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PTTG3PQ9NZH4 202 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 GALPQ9UBC7 116 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 SEC14L4Q9UDX3 406 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 CRYL1Q9Y2S2 319 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 SAMHD1Q9Y3Z3 626 aaKnown RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PMF1-BGLAPU3KQ54 211 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 TAF1P21675 1872 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 C2orf81A6NN90 581 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 AOC2O75106 756 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 SEC22BO75396 215 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 HOXD8P13378 290 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PXNP49023 591 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PGGT1BP53609 377 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 VEZF1Q14119 521 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 TAB1Q15750 504 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PCSK7Q16549 785 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 WDR45BQ5MNZ6 344 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PIK3R6Q5UE93 754 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms