RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 AVPR2P30518 371 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 CLDN2P57739 230 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 SH3BP2P78314 561 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 GSTM4Q03013 218 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 CLCQ05315 142 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 C19orf57Q0VDD7 668 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 SFSWAPQ12872 951 aaKnown RBP6.81□□□□□ -1.32
PTCD2-201ENST00000308077 ABRQ12979 859 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 SP140Q13342 867 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 NFE2L1Q14494 772 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 PCBP2Q15366 365 aaKnown RBP eCLIP6.81□□□□□ -1.32
PTCD2-201ENST00000308077 ZXDCQ2QGD7 858 aaPredicted RBP6.81□□□□□ -1.32
PTCD2-201ENST00000308077 SLC9B1Q4ZJI4 515 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 SH2D4BQ5SQS7 431 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 ANKS6Q68DC2 871 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 TRPM8Q7Z2W7 1104 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 SLC22A15Q8IZD6 547 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 FRMD1Q8N878 549 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 TSTD1Q8NFU3 115 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 OR2L2Q8NH16 312 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 TRPC4APQ8TEL6 797 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 SKA2Q8WVK7 121 aaPredicted RBP6.81□□□□□ -1.32
PTCD2-201ENST00000308077 ASB12Q8WXK4 309 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 CCT6BQ92526 530 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 TMEM159Q96B96 161 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 SKA1Q96BD8 255 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 ZNF514Q96K75 400 aaPredicted RBP6.81□□□□□ -1.32
PTCD2-201ENST00000308077 PLCD4Q9BRC7 762 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 SIKE1Q9BRV8 207 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 APOOQ9BUR5 198 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 SLC12A9Q9BXP2 914 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 C6orf106Q9H6K1 298 aaPredicted RBP6.81□□□□□ -1.32
PTCD2-201ENST00000308077 TBC1D17Q9HA65 648 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 SGK2Q9HBY8 427 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 PHPT1Q9NRX4 125 aaPredicted RBP6.81□□□□□ -1.32
PTCD2-201ENST00000308077 DNAJC28Q9NX36 388 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 ZNF225Q9UK10 706 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 TMCO1Q9UM00 188 aa6.81□□□□□ -1.32
PTCD2-201ENST00000308077 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.81□□□□□ -1.32
PTCD2-201ENST00000308077 LRP4O75096 1905 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 C17orf113A0A1B0GUU1 675 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 MGAT4DA6NG13 374 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 LRRC72A6NJI9 287 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 EIF4E1BA6NMX2 242 aaKnown RBP6.8□□□□□ -1.32
PTCD2-201ENST00000308077 ARHGEF33A8MVX0 844 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 LIN7AO14910 233 aaPredicted RBP6.8□□□□□ -1.32
PTCD2-201ENST00000308077 SLC16A5O15375 505 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 LATO43561 262 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 PSIP1O75475 530 aaKnown RBP6.8□□□□□ -1.32
PTCD2-201ENST00000308077 SEMA4FO95754 770 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 S100BP04271 92 aaPredicted RBP6.8□□□□□ -1.32
PTCD2-201ENST00000308077 CEACAM5P06731 702 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 ENO2P09104 434 aaPredicted RBP6.8□□□□□ -1.32
PTCD2-201ENST00000308077 SERPINB3P29508 390 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 PRDX3P30048 256 aaKnown RBP6.8□□□□□ -1.32
PTCD2-201ENST00000308077 BDKRB1P46663 353 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 HSPA7P48741 367 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 RPIAP49247 311 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 IDH3AP50213 366 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 ARHGAP8P85298 464 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 CCSMST1Q4G0I0 132 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.8□□□□□ -1.32
PTCD2-201ENST00000308077 TPRG1LQ5T0D9 272 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 CLEC6AQ6EIG7 209 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 EPGNQ6UW88 154 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 LRRTM4Q86VH4 590 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 SPATS2Q86XZ4 545 aaKnown RBP6.8□□□□□ -1.32
PTCD2-201ENST00000308077 CFAP206Q8IYR0 622 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 OXR1Q8N573 874 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 HM13Q8TCT9 377 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 AGAP11Q8TF27 550 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 UBTD2Q8WUN7 234 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 SHDQ96IW2 340 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 EGFL8Q99944 293 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 TRMOQ9BU70 441 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 C1QTNF7Q9BXJ2 289 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 TPSD1Q9BZJ3 242 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 MYLK2Q9H1R3 596 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 PARVBQ9HBI1 364 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 SEMA4BQ9NPR2 832 aaPredicted RBP6.8□□□□□ -1.32
PTCD2-201ENST00000308077 HEY2Q9UBP5 337 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 RRP15Q9Y3B9 282 aaKnown RBP6.8□□□□□ -1.32
PTCD2-201ENST00000308077 FIS1Q9Y3D6 152 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 CEP250Q9BV73 2442 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 TRIOO75962 3097 aa6.8□□□□□ -1.32
PTCD2-201ENST00000308077 HDAC3O15379 428 aa6.79□□□□□ -1.32
PTCD2-201ENST00000308077 UBOX5O94941 541 aa6.79□□□□□ -1.32
PTCD2-201ENST00000308077 SNUPNO95149 360 aaKnown RBP6.79□□□□□ -1.32
PTCD2-201ENST00000308077 IGHV4-34P06331 123 aa6.79□□□□□ -1.32
PTCD2-201ENST00000308077 GDF5P43026 501 aa6.79□□□□□ -1.32
PTCD2-201ENST00000308077 FOXA1P55317 472 aa6.79□□□□□ -1.32
PTCD2-201ENST00000308077 CDKL1Q00532 357 aa6.79□□□□□ -1.32
PTCD2-201ENST00000308077 LCP2Q13094 533 aa6.79□□□□□ -1.32
PTCD2-201ENST00000308077 PDCD2Q16342 344 aaPredicted RBP6.79□□□□□ -1.32
PTCD2-201ENST00000308077 GALNTL6Q49A17 601 aa6.79□□□□□ -1.32
PTCD2-201ENST00000308077 SULT1C3Q6IMI6 304 aa6.79□□□□□ -1.32
PTCD2-201ENST00000308077 GCNT7Q6ZNI0 430 aa6.79□□□□□ -1.32
PTCD2-201ENST00000308077 GOLGA7Q7Z5G4 137 aa6.79□□□□□ -1.32
PTCD2-201ENST00000308077 SYVN1Q86TM6 617 aa6.79□□□□□ -1.32
PTCD2-201ENST00000308077 MTDHQ86UE4 582 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms