RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 PIK3CGP48736 1102 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 MRPL19P49406 292 aaKnown RBP11.62□□□□□ -0.55
TRIM40-205ENST00000307859 AP1S2P56377 157 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 SLC25A3Q00325 362 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 GSTM4Q03013 218 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 PUM1Q14671 1186 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRIM40-205ENST00000307859 RAET1GQ6H3X3 334 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 MBOAT1Q6ZNC8 495 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 RNF165Q6ZSG1 346 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 LRRC70Q7Z2Q7 622 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 ADGRG6Q86SQ4 1221 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 SCUBE1Q8IWY4 988 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 ULK2Q8IYT8 1036 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 OR4F6Q8NGB9 312 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 CNTNAP3BQ96NU0 1288 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 THTPAQ9BU02 230 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 TRIM54Q9BYV2 358 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 CNTNAP3Q9BZ76 1288 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 IPPKQ9H8X2 491 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 TRPV5Q9NQA5 729 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 ARL15Q9NXU5 204 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.62□□□□□ -0.55
TRIM40-205ENST00000307859 PCM1Q15154 2024 aa11.62□□□□□ -0.55
TRIM40-205ENST00000307859 A0A088AWK7 358 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 PSMD12O00232 456 aaPredicted RBP11.61□□□□□ -0.55
TRIM40-205ENST00000307859 CCNT2O60583 730 aaKnown RBP11.61□□□□□ -0.55
TRIM40-205ENST00000307859 RNASEH1O60930 286 aaKnown RBP11.61□□□□□ -0.55
TRIM40-205ENST00000307859 PSIP1O75475 530 aaKnown RBP11.61□□□□□ -0.55
TRIM40-205ENST00000307859 SLC6A12P48065 614 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 ACADVLP49748 655 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 HNMTP50135 292 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 FASTKQ14296 549 aaKnown RBP11.61□□□□□ -0.55
TRIM40-205ENST00000307859 GRB7Q14451 532 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 AGERQ15109 404 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 MAPRE2Q15555 327 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 SYTL3Q4VX76 610 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 TMEM220Q6QAJ8 160 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 ADAMTSL4Q6UY14 1074 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 HOMEZQ8IX15 550 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 SLC22A15Q8IZD6 547 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 CDYL2Q8N8U2 506 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 OR2T3Q8NH03 318 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 MAGEC3Q8TD91 643 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 KCNV2Q8TDN2 545 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 FAM131CQ96AQ9 280 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 TUBGCP3Q96CW5 907 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 CDK15Q96Q40 435 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 GABRG3Q99928 467 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 NTMT1Q9BV86 223 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 SLC32A1Q9H598 525 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 TRIM39Q9HCM9 518 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 GULP1Q9UBP9 304 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 TRPS1Q9UHF7 1281 aa11.61□□□□□ -0.55
TRIM40-205ENST00000307859 KMT2BQ9UMN6 2715 aaPredicted RBP11.61□□□□□ -0.55
TRIM40-205ENST00000307859 VEGFDO43915 354 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 SYNCRIPO60506 623 aaKnown RBP11.6□□□□□ -0.55
TRIM40-205ENST00000307859 PEX11AO75192 247 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 STK16O75716 305 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 CAPN1P07384 714 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 HIST1H2AGP0C0S8 130 aaPredicted RBP11.6□□□□□ -0.55
TRIM40-205ENST00000307859 EBLN1P0CF75 366 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 HIST1H2ADP20671 130 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 GPX3P22352 226 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 NTSR1P30989 418 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 TIE1P35590 1138 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 GDF5P43026 501 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 MAPK9P45984 424 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 CCNG1P51959 295 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 SEC13P55735 322 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 STX1BP61266 288 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 RPS14P62263 151 aaKnown RBP11.6□□□□□ -0.55
TRIM40-205ENST00000307859 ZXDCQ2QGD7 858 aaPredicted RBP11.6□□□□□ -0.55
TRIM40-205ENST00000307859 ZNF776Q68DI1 518 aaPredicted RBP11.6□□□□□ -0.55
TRIM40-205ENST00000307859 PGM2L1Q6PCE3 622 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 GK5Q6ZS86 529 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 SPATA19Q7Z5L4 167 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 TRIM74Q86UV6 250 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 DCBLD1Q8N8Z6 715 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 KYQ8NBH2 561 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 OR2T11Q8NH01 316 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 SKA2Q8WVK7 121 aaPredicted RBP11.6□□□□□ -0.55
TRIM40-205ENST00000307859 TMEM159Q96B96 161 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 RCN3Q96D15 328 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 ERLEC1Q96DZ1 483 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 COX14Q96I36 57 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 ZNF514Q96K75 400 aaPredicted RBP11.6□□□□□ -0.55
TRIM40-205ENST00000307859 HIST1H2AHQ96KK5 128 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 LINC00615Q96LM1 132 aaPredicted RBP11.6□□□□□ -0.55
TRIM40-205ENST00000307859 HIST1H2AJQ99878 128 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 H2AFJQ9BTM1 129 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 FBRSQ9HAH7 460 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 RIC8BQ9NVN3 520 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 GIMAP2Q9UG22 337 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 SLC7A8Q9UHI5 535 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 ANGPTL3Q9Y5C1 460 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 ARHGEF33A8MVX0 844 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 AIM2O14862 343 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 LIN7AO14910 233 aaPredicted RBP11.6□□□□□ -0.55
TRIM40-205ENST00000307859 KATNA1O75449 491 aa11.6□□□□□ -0.55
TRIM40-205ENST00000307859 WDR47O94967 919 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms