RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 ATP6AP2A0A1C7CYW4 349 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 ZNF185O15231 689 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 FAM20BO75063 409 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 ENTPD6O75354 484 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 ATP6AP2O75787 350 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 ADORA2BP29275 332 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 ADNP2Q6IQ32 1131 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 ZNF767PQ75MW2 155 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 C4orf33Q8N1A6 199 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 PRELID2Q8N945 189 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 CAMKVQ8NCB2 501 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 CAB39LQ9H9S4 337 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 CHRAC1Q9NRG0 131 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 LY75O60449 1722 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 RALGAPA1Q6GYQ0 2036 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 DGKGP49619 791 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 CTBP2P56545 445 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 TMEM35AQ53FP2 167 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 RAB41Q5JT25 222 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 WDR88Q6ZMY6 472 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 PHACTR4Q8IZ21 702 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 ZNF366Q8N895 744 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 ATAD1Q8NBU5 361 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 CCDC54Q8NEL0 328 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 HYLS1Q96M11 299 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 SPG21Q9NZD8 308 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 KCNN3Q9UGI6 736 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 TRPM6Q9BX84 2022 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 A0A0J9YYE9 177 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 NOBOXO60393 691 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 SNX4O95219 450 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 TYRP14679 529 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 PORP16435 677 aaPredicted RBP3.95□□□□□ -1.78
USH2A-201ENST00000307340 RBL1P28749 1068 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 CMPK1P30085 196 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 NAGLUP54802 743 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 VEZF1Q14119 521 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 MOGQ16653 247 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 ADGRF1Q5T601 910 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 PRPF38BQ5VTL8 546 aaKnown RBP3.95□□□□□ -1.78
USH2A-201ENST00000307340 CDYL2Q8N8U2 506 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 TMEM209Q96SK2 561 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 ZNF382Q96SR6 550 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 P2RX2Q9UBL9 471 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 CASC3O15234 703 aaKnown RBP3.95□□□□□ -1.78
USH2A-201ENST00000307340 FAM155BO75949 473 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 CYP11A1P05108 521 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 GLAP06280 429 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 FOXN2P32314 431 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 SLC15A1P46059 708 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 HTR3AP46098 478 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 EIF2B2P49770 351 aaKnown RBP3.95□□□□□ -1.78
USH2A-201ENST00000307340 ATP12AP54707 1039 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 NRG3P56975 720 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 FUT2Q10981 343 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 CCINQ13939 588 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 PRAMEF8Q5VWM4 474 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 PRAMEF7Q5VXH5 474 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 GLB1L2Q8IW92 636 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 DND1Q8IYX4 353 aaKnown RBP3.95□□□□□ -1.78
USH2A-201ENST00000307340 Q8N402 240 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 EXOC2Q96KP1 924 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 LACRTQ9GZZ8 138 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 SIRPGQ9P1W8 387 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 KCNU1A8MYU2 1149 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 OR6B1O95007 311 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 HBQ1P09105 142 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 IRF8Q02556 426 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 LRP8Q14114 963 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 FASTKD3Q14CZ7 662 aaKnown RBP3.95□□□□□ -1.78
USH2A-201ENST00000307340 UNC5AQ6ZN44 842 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 MAPK15Q8TD08 544 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 TCF25Q9BQ70 676 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 SPON2Q9BUD6 331 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 TKTL2Q9H0I9 626 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 PIGVQ9NUD9 493 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 KLF15Q9UIH9 416 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 ZNF236Q9UL36 1845 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 CCL15-CCL14A0A0B4J2E2 113 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 ABHD14A-ACY1A0A1B0GW23 586 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 SLC33A1O00400 549 aaPredicted RBP3.95□□□□□ -1.78
USH2A-201ENST00000307340 ATMINO43313 823 aaPredicted RBP3.95□□□□□ -1.78
USH2A-201ENST00000307340 DPM1O60762 260 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 PPM1BO75688 479 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 IFNA6P05013 189 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 SLC35G4P0C7Q5 338 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 CLCA4Q14CN2 919 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 CCL15Q16663 113 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 SLC9A4Q6AI14 798 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 DCP2Q8IU60 420 aaKnown RBP3.95□□□□□ -1.78
USH2A-201ENST00000307340 ANKFN1Q8N957 763 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 C17orf50Q8WW18 174 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 TMEM234Q8WY98 164 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 ACSF2Q96CM8 615 aaPredicted RBP3.95□□□□□ -1.78
USH2A-201ENST00000307340 ZNF717Q9BY31 904 aaPredicted RBP3.95□□□□□ -1.78
USH2A-201ENST00000307340 POLMQ9NP87 494 aaPredicted RBP3.95□□□□□ -1.78
USH2A-201ENST00000307340 KLRG2A4D1S0 409 aaPredicted RBP3.95□□□□□ -1.78
USH2A-201ENST00000307340 NEMP2A6NFY4 417 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 BHMG1C9JSJ3 638 aaPredicted RBP3.95□□□□□ -1.78
USH2A-201ENST00000307340 CD247P20963 164 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms