RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 COPG2Q9UBF2 871 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 VPS4AQ9UN37 437 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 ERVK-11Q9UQG0 969 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 POLR3HQ9Y535 204 aaPredicted RBP9.08□□□□□ -0.96
PTPRE-202ENST00000306042 SNX5Q9Y5X3 404 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 BCAT2O15382 392 aaPredicted RBP9.08□□□□□ -0.96
PTPRE-202ENST00000306042 HK2P52789 917 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 NIPAL4Q0D2K0 466 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 ARHGAP40Q5TG30 622 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 USP53Q70EK8 1073 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 DCP2Q8IU60 420 aaKnown RBP9.08□□□□□ -0.96
PTPRE-202ENST00000306042 ATXN2LQ8WWM7 1075 aaKnown RBP9.08□□□□□ -0.96
PTPRE-202ENST00000306042 PEX13Q92968 403 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 ZNF689Q96CS4 500 aaPredicted RBP9.08□□□□□ -0.96
PTPRE-202ENST00000306042 SLC39A13Q96H72 371 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 C17orf62Q9BQA9 187 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 CNPPD1Q9BV87 410 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 CRISPLD1Q9H336 500 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 IL21RQ9HBE5 538 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 MRM3Q9HC36 420 aaKnown RBP9.08□□□□□ -0.96
PTPRE-202ENST00000306042 AP3M1Q9Y2T2 418 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 PLLPQ9Y342 182 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 TIMM22Q9Y584 194 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 PCDHGB3Q9Y5G1 929 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 ACTL7AQ9Y615 435 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 DGKBQ9Y6T7 804 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 TNFRSF10BO14763 440 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 IGHEP01854 428 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 UMPSP11172 480 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 ADAM15Q13444 863 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 CILP2Q8IUL8 1156 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 EXOSC8Q96B26 276 aaKnown RBP9.08□□□□□ -0.96
PTPRE-202ENST00000306042 REXO5Q96IC2 774 aaKnown RBP9.08□□□□□ -0.96
PTPRE-202ENST00000306042 GAL3ST4Q96RP7 486 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 MGME1Q9BQP7 344 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 MECRQ9BV79 373 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 SPATA5L1Q9BVQ7 753 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 ARFGEF1Q9Y6D6 1849 aa9.08□□□□□ -0.96
PTPRE-202ENST00000306042 ANKRD65E5RJM6 399 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 EGFP01133 1207 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 BPGMP07738 259 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 ITGB8P26012 769 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 SERPINB3P29508 390 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 EIF2DP41214 584 aaKnown RBP9.07□□□□□ -0.96
PTPRE-202ENST00000306042 VAC14Q08AM6 782 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 SLBPQ14493 270 aaKnown RBP eCLIP9.07□□□□□ -0.96
PTPRE-202ENST00000306042 SEMA3AQ14563 771 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 PLEKHS1Q5SXH7 462 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 ZNF648Q5T619 568 aaPredicted RBP9.07□□□□□ -0.96
PTPRE-202ENST00000306042 TSPAN33Q86UF1 283 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 SNX32Q86XE0 403 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 SAMD14Q8IZD0 417 aaPredicted RBP9.07□□□□□ -0.96
PTPRE-202ENST00000306042 CATSPER1Q8NEC5 780 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 OR9A1PQ8NGU1 263 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 ADAMTS15Q8TE58 950 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 RSPH9Q9H1X1 276 aaPredicted RBP9.07□□□□□ -0.96
PTPRE-202ENST00000306042 PDE7BQ9NP56 450 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 EXD2Q9NVH0 621 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 HCN3Q9P1Z3 774 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 DMTF1Q9Y222 760 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 KRT87PA6NCN2 255 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 WASH4PA8MWX3 477 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 FCHO1O14526 889 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 MAOBP27338 520 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 ZNF252P-AS1Q0IIN9 211 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 HEPACAMQ14CZ8 416 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 CRTC1Q6UUV9 634 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 TP53INP2Q8IXH6 220 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 GLIS1Q8NBF1 620 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 TADA1Q96BN2 335 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 TPD52L3Q96J77 140 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 NSMCE2Q96MF7 247 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 TBCDQ9BTW9 1192 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 CPEB1Q9BZB8 566 aaKnown RBP9.07□□□□□ -0.96
PTPRE-202ENST00000306042 TK2O00142 265 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 PSMD11O00231 422 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 HNRNPRO43390 633 aaKnown RBP9.07□□□□□ -0.96
PTPRE-202ENST00000306042 UBXN7O94888 489 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 MATN4O95460 622 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 IDO1P14902 403 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 CALB2P22676 271 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 ITPKBP27987 946 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 FAM214AQ32MH5 1076 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 ZYG11AQ6WRX3 759 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 PARS2Q7L3T8 475 aaKnown RBP9.07□□□□□ -0.96
PTPRE-202ENST00000306042 EXOC3L1Q86VI1 746 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 PLXDC1Q8IUK5 500 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 ZC3H7AQ8IWR0 971 aaKnown RBP9.07□□□□□ -0.96
PTPRE-202ENST00000306042 ZDHHC1Q8WTX9 485 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 KCNJ9Q92806 393 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 KCNN1Q92952 543 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 ZSWIM3Q96MP5 696 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 TGM7Q96PF1 710 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 HERPUD2Q9BSE4 406 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 MVB12BQ9H7P6 319 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 EQTNQ9NQ60 294 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 GRHL1Q9NZI5 618 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 CORO2BQ9UQ03 480 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 MCM3APO60318 1980 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 RFXANKO14593 260 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms