RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 KLQ9UEF7 1012 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 ASB1Q9Y576 335 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 MAP3K13O43283 966 aa24.03■■□□□ 1.44
GTF2A1-201ENST00000298173 LAMTOR5O43504 91 aa24.03■■□□□ 1.44
GTF2A1-201ENST00000298173 C1orf105O95561 183 aa24.03■■□□□ 1.44
GTF2A1-201ENST00000298173 ANXA5P08758 320 aa24.03■■□□□ 1.44
GTF2A1-201ENST00000298173 GGT5P36269 586 aa24.03■■□□□ 1.44
GTF2A1-201ENST00000298173 CLCNKAP51800 687 aa24.03■■□□□ 1.44
GTF2A1-201ENST00000298173 FBXO48Q5FWF7 155 aa24.03■■□□□ 1.44
GTF2A1-201ENST00000298173 ANKS6Q68DC2 871 aa24.03■■□□□ 1.44
GTF2A1-201ENST00000298173 CAPRIN2Q6IMN6 1127 aaKnown RBP24.03■■□□□ 1.44
GTF2A1-201ENST00000298173 UBTD2Q8WUN7 234 aa24.03■■□□□ 1.44
GTF2A1-201ENST00000298173 ESAMQ96AP7 390 aa24.03■■□□□ 1.44
GTF2A1-201ENST00000298173 HSPA12BQ96MM6 686 aa24.03■■□□□ 1.44
GTF2A1-201ENST00000298173 ARL15Q9NXU5 204 aa24.03■■□□□ 1.44
GTF2A1-201ENST00000298173 TNPO3Q9Y5L0 923 aaKnown RBP24.03■■□□□ 1.44
GTF2A1-201ENST00000298173 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 HSPA4LO95757 839 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 CATP04040 527 aaKnown RBP24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 S100BP04271 92 aaPredicted RBP24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 WNT1P04628 370 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 MAOBP27338 520 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 RACK1P63244 317 aaKnown RBP24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 EIF2B5Q13144 721 aaKnown RBP24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 FZD2Q14332 565 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 C18orf21Q32NC0 220 aaPredicted RBP24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 METTL2BQ6P1Q9 378 aaKnown RBP24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 UNC5DQ6UXZ4 953 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 MBOAT1Q6ZNC8 495 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 IQCHQ86VS3 1027 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 DCP2Q8IU60 420 aaKnown RBP24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 TMEFF1Q8IYR6 380 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 PIWIL2Q8TC59 973 aaKnown RBP24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 ZNF483Q8TF39 744 aaPredicted RBP24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 TMEM79Q9BSE2 394 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 AASDHPPTQ9NRN7 309 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 TRNAU1APQ9NX07 287 aaKnown RBP24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 PCTPQ9UKL6 214 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 KCNK6Q9Y257 313 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 RAP2CQ9Y3L5 183 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 THADAQ6YHU6 1953 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 ZDBF2Q9HCK1 2354 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 E2F3O00716 465 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 CDH13P55290 713 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 LRP8Q14114 963 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 LONP2Q86WA8 852 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 PPP4R1Q8TF05 950 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 NSUN5Q96P11 429 aaKnown RBP24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 EGFL8Q99944 293 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 ILKAPQ9H0C8 392 aaPredicted RBP24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 WDR37Q9Y2I8 494 aa24.02■■□□□ 1.44
GTF2A1-201ENST00000298173 UBFD1O14562 309 aaKnown RBP24.01■■□□□ 1.43
GTF2A1-201ENST00000298173 MAP4P27816 1152 aaKnown RBP24.01■■□□□ 1.43
GTF2A1-201ENST00000298173 CD38P28907 300 aa24.01■■□□□ 1.43
GTF2A1-201ENST00000298173 HNMTP50135 292 aa24.01■■□□□ 1.43
GTF2A1-201ENST00000298173 CLCQ05315 142 aa24.01■■□□□ 1.43
GTF2A1-201ENST00000298173 PRKAA1Q13131 559 aa24.01■■□□□ 1.43
GTF2A1-201ENST00000298173 CCSMST1Q4G0I0 132 aa24.01■■□□□ 1.43
GTF2A1-201ENST00000298173 TCAIMQ8N3R3 496 aa24.01■■□□□ 1.43
GTF2A1-201ENST00000298173 ZNF781Q8N8C0 355 aa24.01■■□□□ 1.43
GTF2A1-201ENST00000298173 TFGQ92734 400 aaPredicted RBP24.01■■□□□ 1.43
GTF2A1-201ENST00000298173 RMDN2Q96LZ7 410 aa24.01■■□□□ 1.43
GTF2A1-201ENST00000298173 CCDC138Q96M89 665 aa24.01■■□□□ 1.43
GTF2A1-201ENST00000298173 CD244Q9BZW8 370 aa24.01■■□□□ 1.43
GTF2A1-201ENST00000298173 WWP1Q9H0M0 922 aa24.01■■□□□ 1.43
GTF2A1-201ENST00000298173 ZBTB26Q9HCK0 441 aa24.01■■□□□ 1.43
GTF2A1-201ENST00000298173 PNPOQ9NVS9 261 aa24.01■■□□□ 1.43
GTF2A1-201ENST00000298173 KLHL14Q9P2G3 628 aa24.01■■□□□ 1.43
GTF2A1-201ENST00000298173 PSMD13Q9UNM6 376 aa24.01■■□□□ 1.43
GTF2A1-201ENST00000298173 MEI4A8MW99 385 aa24■■□□□ 1.43
GTF2A1-201ENST00000298173 IDSP22304 550 aa24■■□□□ 1.43
GTF2A1-201ENST00000298173 RPL10P27635 214 aaKnown RBP24■■□□□ 1.43
GTF2A1-201ENST00000298173 CTBSQ01459 385 aa24■■□□□ 1.43
GTF2A1-201ENST00000298173 GKAP1Q5VSY0 366 aaPredicted RBP24■■□□□ 1.43
GTF2A1-201ENST00000298173 RD3Q7Z3Z2 195 aa24■■□□□ 1.43
GTF2A1-201ENST00000298173 SPATA21Q7Z572 469 aa24■■□□□ 1.43
GTF2A1-201ENST00000298173 FBXL8Q96CD0 374 aa24■■□□□ 1.43
GTF2A1-201ENST00000298173 TRIM55Q9BYV6 548 aa24■■□□□ 1.43
GTF2A1-201ENST00000298173 TMEM168Q9H0V1 697 aa24■■□□□ 1.43
GTF2A1-201ENST00000298173 KCNK13Q9HB14 408 aa24■■□□□ 1.43
GTF2A1-201ENST00000298173 KLF15Q9UIH9 416 aa24■■□□□ 1.43
GTF2A1-201ENST00000298173 ZDHHC2Q9UIJ5 367 aa24■■□□□ 1.43
GTF2A1-201ENST00000298173 PPP6CO00743 305 aa23.99■■□□□ 1.43
GTF2A1-201ENST00000298173 SCAMP1O15126 338 aa23.99■■□□□ 1.43
GTF2A1-201ENST00000298173 TNFP01375 233 aa23.99■■□□□ 1.43
GTF2A1-201ENST00000298173 BDKRB1P46663 353 aa23.99■■□□□ 1.43
GTF2A1-201ENST00000298173 HSPA7P48741 367 aa23.99■■□□□ 1.43
GTF2A1-201ENST00000298173 CSTF1Q05048 431 aaKnown RBP23.99■■□□□ 1.43
GTF2A1-201ENST00000298173 TTC23LQ6PF05 361 aa23.99■■□□□ 1.43
GTF2A1-201ENST00000298173 HID1Q8IV36 788 aa23.99■■□□□ 1.43
GTF2A1-201ENST00000298173 DTWD2Q8NBA8 298 aa23.99■■□□□ 1.43
GTF2A1-201ENST00000298173 PKP4Q99569 1192 aa23.99■■□□□ 1.43
GTF2A1-201ENST00000298173 EML4Q9HC35 981 aaKnown RBP23.99■■□□□ 1.43
GTF2A1-201ENST00000298173 TM9SF3Q9HD45 589 aa23.99■■□□□ 1.43
GTF2A1-201ENST00000298173 KRT87PA6NCN2 255 aa23.99■■□□□ 1.43
GTF2A1-201ENST00000298173 MYO1CO00159 1063 aa23.99■■□□□ 1.43
GTF2A1-201ENST00000298173 SLC6A12P48065 614 aa23.99■■□□□ 1.43
GTF2A1-201ENST00000298173 WASH2PQ6VEQ5 465 aa23.99■■□□□ 1.43
GTF2A1-201ENST00000298173 BMP8AQ7Z5Y6 402 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms