RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 PTK2BQ14289 1009 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 MAPRE2Q15555 327 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 BCL7AQ4VC05 210 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 XKR7Q5GH72 579 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 TTC23LQ6PF05 361 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 CHCHD4Q8N4Q1 142 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 ST14Q9Y5Y6 855 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 AIM2O14862 343 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 STK16O75716 305 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 CAPN1P07384 714 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 GSTM1P09488 218 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 PIK3CGP48736 1102 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 AP1S2P56377 157 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 GSTM4Q03013 218 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 GRB7Q14451 532 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 ZNF776Q68DI1 518 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-202ENST00000297979 MILR1Q7Z6M3 343 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 ADGRG6Q86SQ4 1221 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 HMGCLL1Q8TB92 370 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 CLPTM1LQ96KA5 538 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 OR2AG1Q9H205 316 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 TRPV5Q9NQA5 729 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 GIMAP2Q9UG22 337 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 CD207Q9UJ71 328 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 HGFP14210 728 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 EPB42P16452 691 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 PBLDP30039 288 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-202ENST00000297979 GGT5P36269 586 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 CLK1P49759 484 aaKnown RBP13.94□□□□□ -0.18
C9orf3-202ENST00000297979 HNMTP50135 292 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 TAS2R38P59533 333 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 GTF2H3Q13889 308 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-202ENST00000297979 CHRDL2Q6WN34 429 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 GK5Q6ZS86 529 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 RASGRP3Q8IV61 690 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 DEFB107AQ8IZN7 70 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 METTL6Q8TCB7 284 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 MCOLN3Q8TDD5 553 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 RCN3Q96D15 328 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 CLIP3Q96DZ5 547 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 TRIM39Q9HCM9 518 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 RIC8BQ9NVN3 520 aa13.94□□□□□ -0.18
C9orf3-202ENST00000297979 A0A088AWK7 358 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 SLC5A10A0PJK1 596 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 KATNA1O75449 491 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 CIB2O75838 187 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 MATN4O95460 622 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 PRR35P0CG20 571 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 ADGRE1Q14246 886 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 AGKQ53H12 422 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 C2orf27AQ580R0 203 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 TCHHL1Q5QJ38 904 aaPredicted RBP13.93□□□□□ -0.18
C9orf3-202ENST00000297979 OGFOD2Q6N063 350 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 LRRC70Q7Z2Q7 622 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 TRAPPC5Q8IUR0 188 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 HDDC3Q8N4P3 179 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 KYQ8NBH2 561 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 OR2T3Q8NH03 318 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 SLC32A1Q9H598 525 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 NTSR1P30989 418 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 PREPP48147 710 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 KIF19Q2TAC6 998 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 C16orf89Q6UX73 402 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 GABRG3Q99928 467 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 TTYH1Q9H313 450 aaPredicted RBP13.93□□□□□ -0.18
C9orf3-202ENST00000297979 CCDC167Q9P0B6 97 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 ATXN10Q9UBB4 475 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 SERGEFQ9UGK8 458 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 COL4A2P08572 1712 aa13.93□□□□□ -0.18
C9orf3-202ENST00000297979 A0A1W2PP55 124 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 IGLON5A6NGN9 336 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 LILRB5O75023 590 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 ENTPD5O75356 428 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 PSIP1O75475 530 aaKnown RBP13.92□□□□□ -0.18
C9orf3-202ENST00000297979 PCDH8O95206 1070 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 IGFBP4P22692 258 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 HMOX2P30519 316 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 MAPK9P45984 424 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 ACADVLP49748 655 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 RPS14P62263 151 aaKnown RBP13.92□□□□□ -0.18
C9orf3-202ENST00000297979 STARD3Q14849 445 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 KPNB1Q14974 876 aaKnown RBP13.92□□□□□ -0.18
C9orf3-202ENST00000297979 SDE2Q6IQ49 451 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 KIAA1211LQ6NV74 962 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 SCIMPQ6UWF3 145 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 SPATA19Q7Z5L4 167 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 SLC22A15Q8IZD6 547 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 LILRA3Q8N6C8 439 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-202ENST00000297979 HIC2Q96JB3 615 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 ZNF514Q96K75 400 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-202ENST00000297979 NTMT1Q9BV86 223 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 PRO3102Q9H379 93 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 EFCAB1Q9HAE3 211 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 NDE1Q9NXR1 346 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 SLC7A8Q9UHI5 535 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 VEGFDO43915 354 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 PEX11AO75192 247 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 EBLN1P0CF75 366 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 POU3F3P20264 500 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms