RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 CLDN9O95484 217 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 MTHFD1P11586 935 aaKnown RBP13.69□□□□□ -0.22
NXF1-201ENST00000294172 NCK1P16333 377 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 VIPR2P41587 438 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 TBCELQ5QJ74 424 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 RTL10Q7L3V2 364 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 PLPP6Q8IY26 295 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 ASB11Q8WXH4 323 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 OTUB2Q96DC9 234 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 PPM1MQ96MI6 270 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 GBP5Q96PP8 586 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 CIB1Q99828 191 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 SLC12A9Q9BXP2 914 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 SLC2A11Q9BYW1 496 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 SLC32A1Q9H598 525 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 COQ10BQ9H8M1 238 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 MARK1Q9P0L2 795 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 ACTR3BQ9P1U1 418 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 KLHL42Q9P2K6 505 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 EIF3LQ9Y262 564 aaKnown RBP13.69□□□□□ -0.22
NXF1-201ENST00000294172 PLXNB3Q9ULL4 1909 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 DHRS12A0PJE2 317 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 C16orf96A6NNT2 1141 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 SLC28A1O00337 649 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 ZNF197O14709 1029 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 INPP4BO15327 924 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 C8GP07360 202 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 ADH5P11766 374 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 CDKL1Q00532 357 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 INPP5AQ14642 412 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 ZXDCQ2QGD7 858 aaPredicted RBP13.69□□□□□ -0.22
NXF1-201ENST00000294172 ZNF805Q5CZA5 627 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 HMBOX1Q6NT76 420 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 KIAA0907Q7Z7F0 614 aaPredicted RBP13.69□□□□□ -0.22
NXF1-201ENST00000294172 C12orf40Q86WS4 652 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 RGL4Q8IZJ4 473 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 C12orf76Q8N812 135 aaPredicted RBP13.69□□□□□ -0.22
NXF1-201ENST00000294172 DUS3LQ96G46 650 aaKnown RBP13.69□□□□□ -0.22
NXF1-201ENST00000294172 P2RY13Q9BPV8 354 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 TRPS1Q9UHF7 1281 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 RAB26Q9ULW5 256 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 USP22Q9UPT9 525 aa13.69□□□□□ -0.22
NXF1-201ENST00000294172 AQP12BA6NM10 295 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 FADS2P1A8MWK0 482 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 ANKRD28O15084 1053 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 DENRO43583 198 aaKnown RBP13.68□□□□□ -0.22
NXF1-201ENST00000294172 NUAK1O60285 661 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 WDR47O94967 919 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 CYP17A1P05093 508 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 ZNF26P17031 533 aaPredicted RBP13.68□□□□□ -0.22
NXF1-201ENST00000294172 EPORP19235 508 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 PSMA4P25789 261 aaKnown RBP13.68□□□□□ -0.22
NXF1-201ENST00000294172 GNPDA1P46926 289 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 CHN2P52757 468 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 GRIN2CQ14957 1233 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 FOXB2Q5VYV0 432 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 METTL2BQ6P1Q9 378 aaKnown RBP13.68□□□□□ -0.22
NXF1-201ENST00000294172 RALGPS2Q86X27 583 aaPredicted RBP13.68□□□□□ -0.22
NXF1-201ENST00000294172 AQP12AQ8IXF9 295 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 CHCHD4Q8N4Q1 142 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 ZNF707Q96C28 371 aaPredicted RBP13.68□□□□□ -0.22
NXF1-201ENST00000294172 LRTM1Q9HBL6 345 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 PCDHGB4Q9UN71 923 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 ITM2BQ9Y287 266 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 PCDHGB5Q9Y5G0 923 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 C15orf38-AP3S2A0A0A6YYH1 394 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 EIF3FO00303 357 aaPredicted RBP13.68□□□□□ -0.22
NXF1-201ENST00000294172 KPNA3O00505 521 aaPredicted RBP13.68□□□□□ -0.22
NXF1-201ENST00000294172 CAPNS1P04632 268 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 ENO2P09104 434 aaPredicted RBP13.68□□□□□ -0.22
NXF1-201ENST00000294172 ITPKAP23677 461 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 VARSP26640 1264 aaKnown RBP13.68□□□□□ -0.22
NXF1-201ENST00000294172 OXTRP30559 389 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 NEK2P51955 445 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 ST8SIA6P61647 398 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 UBE3AQ05086 875 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 GK3PQ14409 553 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 ACOX1Q15067 660 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 CYP51A1Q16850 503 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 ZNF284Q2VY69 593 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 PTCHD3Q3KNS1 767 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 PLEKHS1Q5SXH7 462 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 NAIF1Q69YI7 327 aaPredicted RBP13.68□□□□□ -0.22
NXF1-201ENST00000294172 LCN8Q6JVE9 175 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 UGT2A3Q6UWM9 527 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 TRIM46Q7Z4K8 759 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 ARPINQ7Z6K5 226 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 HID1Q8IV36 788 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 ST13P4Q8IZP2 240 aaPredicted RBP13.68□□□□□ -0.22
NXF1-201ENST00000294172 LIX1Q8N485 282 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 CELF5Q8N6W0 485 aaKnown RBP13.68□□□□□ -0.22
NXF1-201ENST00000294172 CLHC1Q8NHS4 586 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 ZFYVE19Q96K21 471 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 ZBTB18Q99592 522 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 ATG10Q9H0Y0 220 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 CCM2LQ9NUG4 571 aaPredicted RBP13.68□□□□□ -0.22
NXF1-201ENST00000294172 ARMC1Q9NVT9 282 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 TMEM45AQ9NWC5 275 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 SMOXQ9NWM0 555 aa13.68□□□□□ -0.22
NXF1-201ENST00000294172 UBAP1Q9NZ09 502 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms