RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CAMK1GQ96NX5 476 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 PIGUQ9H490 435 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 SLC32A1Q9H598 525 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 MBD2Q9UBB5 411 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 PEX16Q9Y5Y5 336 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 FAM149AA5PLN7 773 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 PSMD11O00231 422 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 IDH3BO43837 385 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 SAGP10523 405 aaPredicted RBP12.57□□□□□ -0.4
PTCD1-201ENST00000292478 ETS2P15036 469 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 AOC1P19801 751 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 ITPKBP27987 946 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 ARFIP1P53367 373 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 RHAGQ02094 409 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 CNKSR3Q6P9H4 555 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 AMZ2Q86W34 360 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 SLC9A6Q92581 669 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 SLC22A18Q96BI1 424 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 COQ10BQ9H8M1 238 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 PIRO00625 290 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 KDELR3O43731 214 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 TOP3BO95985 862 aaKnown RBP12.56□□□□□ -0.4
PTCD1-201ENST00000292478 RPL17P18621 184 aaKnown RBP12.56□□□□□ -0.4
PTCD1-201ENST00000292478 NDUFS1P28331 727 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 SPIN4Q56A73 249 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 ACSBG2Q5FVE4 666 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 GDF6Q6KF10 455 aaPredicted RBP12.56□□□□□ -0.4
PTCD1-201ENST00000292478 OTOP2Q7RTS6 562 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 NUS1Q96E22 293 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 ZNF354BQ96LW1 612 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 DERL2Q9GZP9 239 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 PTTG2Q9NZH5 202 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 CKLFQ9UBR5 152 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 IL36AQ9UHA7 158 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 RABGGTBP53611 331 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 LCN1P1Q5VSP4 162 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 DCBLD1Q8N8Z6 715 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 SH3RF2Q8TEC5 729 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 EBPLQ9BY08 206 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 CXorf21Q9HAI6 301 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 XKRYO14609 159 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 KRT33AO76009 404 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 RASGRP1O95267 797 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 ZBTB11O95625 1053 aaPredicted RBP12.56□□□□□ -0.4
PTCD1-201ENST00000292478 AQP4P55087 323 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 CDH12P55289 794 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 KLHL22Q53GT1 634 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 EPGNQ6UW88 154 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 AHI1Q8N157 1196 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 C1orf74Q96LT6 269 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 IQCF5A8MTL0 148 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 TAF4O00268 1085 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 GADD45GO95257 159 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 H6PDO95479 791 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 NPPAP01160 153 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 EPOP01588 193 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 RPS24P62847 133 aaKnown RBP12.56□□□□□ -0.4
PTCD1-201ENST00000292478 CYP4F8P98187 520 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 GPR17Q13304 367 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 RBM48Q5RL73 367 aaKnown RBP12.56□□□□□ -0.4
PTCD1-201ENST00000292478 OSTM1Q86WC4 334 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 RAB2BQ8WUD1 216 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 OMA1Q96E52 524 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 FCRL4Q96PJ5 515 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 RNF39Q9H2S5 420 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 SLC7A8Q9UHI5 535 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 SIX4Q9UIU6 781 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 DUXAA6NLW8 204 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 B3GALT2O43825 422 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 NME6O75414 186 aaPredicted RBP12.56□□□□□ -0.4
PTCD1-201ENST00000292478 AKT2P31751 481 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 GRIA1P42261 906 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 DNAJB13P59910 316 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 CRHR2Q13324 411 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 RNF220Q5VTB9 566 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 OR2AP1Q8NGE2 309 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 LRRC58Q96CX6 371 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 VPS29Q9UBQ0 182 aa12.56□□□□□ -0.4
PTCD1-201ENST00000292478 NRXN3Q9Y4C0 1643 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 DPPA5A6NC42 116 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 ARHGEF33A8MVX0 844 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 ITM2AO43736 263 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 VIPR1P32241 457 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 RFC2P35250 354 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 ATP4BP51164 291 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 CCL14Q16627 93 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 VITQ6UXI7 678 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 C2orf73Q8N5S3 287 aaPredicted RBP12.55□□□□□ -0.4
PTCD1-201ENST00000292478 LMO3Q8TAP4 145 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 HERVK_113Q902F9 699 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 KCNN2Q9H2S1 579 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 AKTIPQ9H8T0 292 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 TMEM138Q9NPI0 162 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 UBAP1Q9NZ09 502 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 MRPS17Q9Y2R5 130 aaKnown RBP12.55□□□□□ -0.4
PTCD1-201ENST00000292478 COL2A1P02458 1487 aaPredicted RBP12.55□□□□□ -0.4
PTCD1-201ENST00000292478 PPEF2O14830 753 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 MAGEB3O15480 346 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 PCDH7O60245 1069 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 DLX3O60479 287 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms