RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 GPR21Q99679 349 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 WDR83Q9BRX9 315 aaKnown RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 AARSD1Q9BTE6 412 aaKnown RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 NRSN2Q9GZP1 204 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 POLR1BQ9H9Y6 1135 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 UCK1Q9HA47 277 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 THSD1Q9NS62 852 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 ABCF3Q9NUQ8 709 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 NSMCE4AQ9NXX6 385 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 OGFRQ9NZT2 677 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 GALPQ9UBC7 116 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 POLG2Q9UHN1 485 aa6.36□□□□□ -1.39
CD44-204ENST00000279452 TDRD6O60522 2096 aaKnown RBP6.36□□□□□ -1.39
CD44-204ENST00000279452 PLXNB3Q9ULL4 1909 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 MN1Q10571 1320 aaPredicted RBP6.35□□□□□ -1.39
CD44-204ENST00000279452 TCRBV9S1A1TA0A576 114 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 PIPSLA2A3N6 862 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 FAM221BA6H8Z2 402 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 TMEM8BA6NDV4 472 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 C2orf74A8MZ97 194 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 ISM1B1AKI9 464 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 HGSO14964 777 aaPredicted RBP6.35□□□□□ -1.39
CD44-204ENST00000279452 TP73O15350 636 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 MAP3K7O43318 606 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 KIF1CO43896 1103 aaKnown RBP6.35□□□□□ -1.39
CD44-204ENST00000279452 PIAS1O75925 651 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 CATP04040 527 aaKnown RBP6.35□□□□□ -1.39
CD44-204ENST00000279452 CCL4P13236 92 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 CDH3P22223 829 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 MCM3P25205 808 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 MAP4P27816 1152 aaKnown RBP6.35□□□□□ -1.39
CD44-204ENST00000279452 STX2P32856 288 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 SHMT2P34897 504 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 PHBP35232 272 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 LSSP48449 732 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 RGS4P49798 205 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 ADARP55265 1226 aaKnown RBP6.35□□□□□ -1.39
CD44-204ENST00000279452 CFHR1Q03591 330 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 ZFP36L1Q07352 338 aaKnown RBP6.35□□□□□ -1.39
CD44-204ENST00000279452 CAMK2BQ13554 666 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 TRA2AQ13595 282 aaKnown RBP eCLIP6.35□□□□□ -1.39
CD44-204ENST00000279452 SLMAPQ14BN4 828 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 KLHL38Q2WGJ6 581 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 ZNF658BQ4V348 819 aaPredicted RBP6.35□□□□□ -1.39
CD44-204ENST00000279452 ACSBG2Q5FVE4 666 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 TEDDM1Q5T9Z0 273 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 TMEM164Q5U3C3 297 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 STEAP4Q687X5 459 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 FAM45BPQ6NSW5 357 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 ZNF549Q6P9A3 640 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 UNC5DQ6UXZ4 953 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 ZNF574Q6ZN55 896 aaPredicted RBP6.35□□□□□ -1.39
CD44-204ENST00000279452 KIAA0408Q6ZU52 694 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 C3orf62Q6ZUJ4 267 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 DCUN1D3Q8IWE4 304 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 CNTN4Q8IWV2 1026 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 IFT20Q8IY31 132 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 CPNE9Q8IYJ1 553 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 TBC1D21Q8IYX1 336 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 LSMEM2Q8N112 164 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 CACTIN-AS1Q8N1I8 211 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 MYO1HQ8N1T3 1032 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 PPM1NQ8N819 430 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 OR5K2Q8NHB8 316 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 FAM45AQ8TCE6 357 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 MAGEC3Q8TD91 643 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 ZFPM2Q8WW38 1151 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 N4BP2L2Q92802 583 aaPredicted RBP6.35□□□□□ -1.39
CD44-204ENST00000279452 RNF31Q96EP0 1072 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 PRR11Q96HE9 360 aaPredicted RBP6.35□□□□□ -1.39
CD44-204ENST00000279452 IL17FQ96PD4 163 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 FMO2Q99518 471 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 NRTNQ99748 197 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 CTRCQ99895 268 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 KLHL25Q9H0H3 589 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 IRAK4Q9NWZ3 460 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 OCIAD1Q9NX40 245 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 SLC39A1Q9NY26 324 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 TAS2R13Q9NYV9 303 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 DMGDHQ9UI17 866 aaKnown RBP6.35□□□□□ -1.39
CD44-204ENST00000279452 ICKQ9UPZ9 632 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 NFS1Q9Y697 457 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 ZNF292O60281 2723 aa6.35□□□□□ -1.39
CD44-204ENST00000279452 FAM95CA0A1B0GW59 222 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 KRT87PA6NCN2 255 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 TLCD2A6NGC4 264 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 ESPNB1AK53 854 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 MATN2O00339 956 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 BTN3A3O00478 584 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 BTN3A1O00481 513 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 PRAMEF10O60809 474 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 GPC4O75487 556 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 SPAG6O75602 509 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 SLCO2B1O94956 709 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 ACSL3O95573 720 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 AHSGP02765 367 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 ITGA2BP08514 1039 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 GSTA2P09210 222 aa6.34□□□□□ -1.39
CD44-204ENST00000279452 ENO3P13929 434 aaPredicted RBP6.34□□□□□ -1.39
CD44-204ENST00000279452 ACADLP28330 430 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms