RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 SPCS2Q15005 226 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 XKR7Q5GH72 579 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 TBPL2Q6SJ96 375 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 KDELC1Q6UW63 502 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 HFE2Q6ZVN8 426 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 R3HCC1LQ7Z5L2 792 aaKnown RBP10.15□□□□□ -0.78
UPF3B-201ENST00000276201 CILP2Q8IUL8 1156 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 CHCHD4Q8N4Q1 142 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 GPR150Q8NGU9 434 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 C17orf50Q8WW18 174 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 RSPRY1Q96DX4 576 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 MRGPRX2Q96LB1 330 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 SLC46A2Q9BY10 475 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 CPNE5Q9HCH3 593 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 POLR3BQ9NW08 1133 aaPredicted RBP10.15□□□□□ -0.78
UPF3B-201ENST00000276201 OR12D3Q9UGF7 316 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 POLG2Q9UHN1 485 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 PDE10AQ9Y233 779 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 AP3M1Q9Y2T2 418 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 NUP210Q8TEM1 1887 aaPredicted RBP10.15□□□□□ -0.78
UPF3B-201ENST00000276201 TPST1O60507 370 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 PRAMEF12O95522 483 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 NDST3O95803 873 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 HTR1AP08908 422 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 CD1DP15813 335 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 ELK4P28324 431 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 NRG1Q02297 640 aaPredicted RBP10.15□□□□□ -0.79
UPF3B-201ENST00000276201 ACVR1Q04771 509 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 GRB7Q14451 532 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 TXNDC8Q6A555 127 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 TUBA3EQ6PEY2 450 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 PLEKHG7Q6ZR37 379 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 HID1Q8IV36 788 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 IPMKQ8NFU5 416 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 SCAMP5Q8TAC9 235 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 ANKRD49Q8WVL7 239 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 NDRG1Q92597 394 aaKnown RBP10.15□□□□□ -0.79
UPF3B-201ENST00000276201 ELSPBP1Q96BH3 223 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 ASIC4Q96FT7 647 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 NSMCE2Q96MF7 247 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 TRIM62Q9BVG3 475 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 OSBPL10Q9BXB5 764 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 GORASP2Q9H8Y8 452 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 MOV10Q9HCE1 1003 aaKnown RBP10.15□□□□□ -0.79
UPF3B-201ENST00000276201 ZFP14Q9HCL3 533 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 FAM118AQ9NWS6 357 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 PAK1IP1Q9NWT1 392 aaPredicted RBP10.15□□□□□ -0.79
UPF3B-201ENST00000276201 RIMKLBQ9ULI2 386 aa10.15□□□□□ -0.79
UPF3B-201ENST00000276201 MROH6A6NGR9 719 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 HHLA1C9JL84 531 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 SLC16A6O15403 523 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 MSI1O43347 362 aaKnown RBP10.14□□□□□ -0.79
UPF3B-201ENST00000276201 KDM1AO60341 852 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 MAFKO60675 156 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 S1PR4O95977 384 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 SRFP11831 508 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 IL1RNP18510 177 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 EEF1B2P24534 225 aaKnown RBP10.14□□□□□ -0.79
UPF3B-201ENST00000276201 HTR1BP28222 390 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 SIGLEC14Q08ET2 396 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 EIF4EBP2Q13542 120 aaPredicted RBP10.14□□□□□ -0.79
UPF3B-201ENST00000276201 CAPRIN1Q14444 709 aaKnown RBP10.14□□□□□ -0.79
UPF3B-201ENST00000276201 PLCL1Q15111 1095 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 RPS6KA2Q15349 733 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 CLPPQ16740 277 aaPredicted RBP10.14□□□□□ -0.79
UPF3B-201ENST00000276201 DGUOKQ16854 277 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 RFX4Q33E94 735 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 FAM98BQ52LJ0 330 aaKnown RBP10.14□□□□□ -0.79
UPF3B-201ENST00000276201 MANEALQ5VSG8 457 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 BHLHA9Q7RTU4 235 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 GPRIN1Q7Z2K8 1008 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 MON1AQ86VX9 555 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 KIAA2013Q8IYS2 634 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 LGI2Q8N0V4 545 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 ATPAF2Q8N5M1 289 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 BPIFB6Q8NFQ5 453 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 OR6Q1Q8NGQ2 317 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 SPATA22Q8NHS9 363 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 MRPS31Q92665 395 aaKnown RBP10.14□□□□□ -0.79
UPF3B-201ENST00000276201 PHF21BQ96EK2 531 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 TXNDC15Q96J42 360 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 ULBP1Q9BZM6 244 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 SMG9Q9H0W8 520 aaKnown RBP10.14□□□□□ -0.79
UPF3B-201ENST00000276201 TUBB1Q9H4B7 451 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 IL37Q9NZH6 218 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 UBP1Q9NZI7 540 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 DNAJB9Q9UBS3 223 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 UGT2A1Q9Y4X1 527 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 SNX5Q9Y5X3 404 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 HSPE1-MOB4S4R3N1 261 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 ANAPC1Q9H1A4 1944 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 MN1Q10571 1320 aaPredicted RBP10.14□□□□□ -0.79
UPF3B-201ENST00000276201 WASH4PA8MWX3 477 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 ZNF99A8MXY4 864 aaPredicted RBP10.14□□□□□ -0.79
UPF3B-201ENST00000276201 M0R296 226 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 IGLV3-25P01717 112 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 CYBBP04839 570 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 ANXA6P08133 673 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 MTHFD1P11586 935 aaKnown RBP10.14□□□□□ -0.79
UPF3B-201ENST00000276201 DDX6P26196 483 aaKnown RBP eCLIP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms