RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 FFAR2O15552 330 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 FOXD2O60548 495 aaPredicted RBP16.78■□□□□ 0.28
SKP2-201ENST00000274254 C8GP07360 202 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 GSTA1P08263 222 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 XRCC1P18887 633 aaPredicted RBP16.78■□□□□ 0.28
SKP2-201ENST00000274254 CRHR1P34998 444 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 SLC19A1P41440 591 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 SP140Q13342 867 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 ACAP2Q15057 778 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 TSNQ15631 228 aaKnown RBP16.78■□□□□ 0.28
SKP2-201ENST00000274254 TTMPQ5BVD1 217 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 SBSNQ6UWP8 590 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 CDHR3Q6ZTQ4 885 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 OR4C6Q8NH72 309 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 SLC37A2Q8TED4 501 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 ATP6V1G3Q96LB4 118 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 FOPNLQ96NB1 174 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 EDEM2Q9BV94 578 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 DUSP23Q9BVJ7 150 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 SLC12A9Q9BXP2 914 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 TFB2MQ9H5Q4 396 aaKnown RBP16.78■□□□□ 0.28
SKP2-201ENST00000274254 SSU72Q9NP77 194 aaKnown RBP16.78■□□□□ 0.28
SKP2-201ENST00000274254 IMP3Q9NV31 184 aaKnown RBP16.78■□□□□ 0.28
SKP2-201ENST00000274254 ADAMTS6Q9UKP5 1117 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 ASF1AQ9Y294 204 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 HEBP2Q9Y5Z4 205 aa16.78■□□□□ 0.28
SKP2-201ENST00000274254 ASCC3Q8N3C0 2202 aaKnown RBP16.78■□□□□ 0.28
SKP2-201ENST00000274254 ANKRD12Q6UB98 2062 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 CCDC189A1A4V9 331 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 NPEPPSL1A6NEC2 478 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 ARHGEF33A8MVX0 844 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 TRIM38O00635 465 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 SLC16A5O15375 505 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 GLRA3O75311 464 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 C1orf105O95561 183 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 TFEBP19484 476 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 CCT5P48643 541 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 UBE2IP63279 158 aaKnown RBP16.77■□□□□ 0.28
SKP2-201ENST00000274254 OR4D1Q15615 310 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 PPP1R3AQ16821 1122 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 DUS1LQ6P1R4 473 aaKnown RBP16.77■□□□□ 0.28
SKP2-201ENST00000274254 KLC3Q6P597 504 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 ASCL5Q7RTU5 278 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 ADAMTSL2Q86TH1 951 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 TBC1D21Q8IYX1 336 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 GOLGA6L1Q8N7Z2 621 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 FBXO15Q8NCQ5 510 aaPredicted RBP16.77■□□□□ 0.28
SKP2-201ENST00000274254 PHC3Q8NDX5 983 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 GPR156Q8NFN8 814 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 OR5K2Q8NHB8 316 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 CFAP61Q8NHU2 1237 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 RHEBL1Q8TAI7 183 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 APOPT1Q96IL0 206 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 CPNE7Q9UBL6 633 aa16.77■□□□□ 0.28
SKP2-201ENST00000274254 ZFHX2Q9C0A1 2572 aaPredicted RBP16.77■□□□□ 0.28
SKP2-201ENST00000274254 FAM186AA6NE01 2351 aa16.77■□□□□ 0.27
SKP2-201ENST00000274254 COPEO14579 308 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 TYROBPO43914 113 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 CATP04040 527 aaKnown RBP16.76■□□□□ 0.27
SKP2-201ENST00000274254 ALPPL2P10696 532 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 FASLGP48023 281 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 GLRBP48167 497 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 MAGOHP61326 146 aaKnown RBP16.76■□□□□ 0.27
SKP2-201ENST00000274254 SLC14A1Q13336 389 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 TECRLQ5HYJ1 363 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.76■□□□□ 0.27
SKP2-201ENST00000274254 ZCCHC8Q6NZY4 707 aaKnown RBP16.76■□□□□ 0.27
SKP2-201ENST00000274254 UBE2R2Q712K3 238 aaPredicted RBP16.76■□□□□ 0.27
SKP2-201ENST00000274254 TMEM151AQ8N4L1 468 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 ARL10Q8N8L6 244 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 FAM181AQ8N9Y4 354 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 OR5AR1Q8NGP9 310 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 TSNARE1Q96NA8 513 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 ALG9Q9H6U8 611 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 MVB12BQ9H7P6 319 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 PARVBQ9HBI1 364 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 TMEM9BQ9NQ34 198 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 POT1Q9NUX5 634 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 TMEM216Q9P0N5 145 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 SIRPGQ9P1W8 387 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 RAPGEFL1Q9UHV5 662 aa16.76■□□□□ 0.27
SKP2-201ENST00000274254 TRBV23OR9-2A0A075B6M9 112 aa16.75■□□□□ 0.27
SKP2-201ENST00000274254 HMGB1P1B2RPK0 211 aaPredicted RBP16.75■□□□□ 0.27
SKP2-201ENST00000274254 RPN2P04844 631 aa16.75■□□□□ 0.27
SKP2-201ENST00000274254 ENO2P09104 434 aaPredicted RBP16.75■□□□□ 0.27
SKP2-201ENST00000274254 NDUFS1P28331 727 aa16.75■□□□□ 0.27
SKP2-201ENST00000274254 KCNC1P48547 511 aa16.75■□□□□ 0.27
SKP2-201ENST00000274254 KPNA2P52292 529 aaKnown RBP16.75■□□□□ 0.27
SKP2-201ENST00000274254 SUZ12Q15022 739 aaKnown RBP16.75■□□□□ 0.27
SKP2-201ENST00000274254 PHKG1Q16816 387 aa16.75■□□□□ 0.27
SKP2-201ENST00000274254 C14orf28Q4W4Y0 310 aa16.75■□□□□ 0.27
SKP2-201ENST00000274254 SLC9B2Q86UD5 537 aa16.75■□□□□ 0.27
SKP2-201ENST00000274254 DCUN1D3Q8IWE4 304 aa16.75■□□□□ 0.27
SKP2-201ENST00000274254 SLC35F3Q8IY50 421 aa16.75■□□□□ 0.27
SKP2-201ENST00000274254 ARL14Q8N4G2 192 aa16.75■□□□□ 0.27
SKP2-201ENST00000274254 KYQ8NBH2 561 aa16.75■□□□□ 0.27
SKP2-201ENST00000274254 STAG3L4Q8TBR4 150 aa16.75■□□□□ 0.27
SKP2-201ENST00000274254 MAPK15Q8TD08 544 aa16.75■□□□□ 0.27
SKP2-201ENST00000274254 CXorf40BQ96DE9 158 aa16.75■□□□□ 0.27
SKP2-201ENST00000274254 ATOH8Q96SQ7 321 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms