RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 NKIRAS1Q9NYS0 192 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 KLHL42Q9P2K6 505 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 GRID1Q9ULK0 1009 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 RUVBL2Q9Y230 463 aaKnown RBP20.22■□□□□ 0.83
RTCA-201ENST00000260563 PLLPQ9Y342 182 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 OR5K4A6NMS3 321 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 NOBOXO60393 691 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 LTA4HP09960 611 aaKnown RBP20.22■□□□□ 0.83
RTCA-201ENST00000260563 FAM83EQ2M2I3 478 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 TSNAXIP1Q2TAA8 658 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 N4BP2L1Q5TBK1 243 aaPredicted RBP20.22■□□□□ 0.83
RTCA-201ENST00000260563 ABRAXAS1Q6UWZ7 409 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 SLC35F3Q8IY50 421 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 CPNE9Q8IYJ1 553 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 SPATA6LQ8N4H0 392 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 NKAPQ8N5F7 415 aaKnown RBP20.22■□□□□ 0.83
RTCA-201ENST00000260563 FAM181AQ8N9Y4 354 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 MDM1Q8TC05 714 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 MAPK15Q8TD08 544 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 PATE1Q8WXA2 126 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 NXNL1Q96CM4 212 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 OR52A5Q9H2C5 316 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 ZNF358Q9NW07 568 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 NCKIPSDQ9NZQ3 722 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 FTSJ1Q9UET6 329 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 CDV3Q9UKY7 258 aaKnown RBP20.22■□□□□ 0.83
RTCA-201ENST00000260563 WDR37Q9Y2I8 494 aa20.22■□□□□ 0.83
RTCA-201ENST00000260563 KIR2DS5A0A0G2JLQ3 304 aa20.21■□□□□ 0.83
RTCA-201ENST00000260563 A0A0G2JNG1 304 aa20.21■□□□□ 0.83
RTCA-201ENST00000260563 KIR2DS3K7RE56 304 aa20.21■□□□□ 0.83
RTCA-201ENST00000260563 IFRD1O00458 451 aaPredicted RBP20.21■□□□□ 0.83
RTCA-201ENST00000260563 GPC4O75487 556 aa20.21■□□□□ 0.83
RTCA-201ENST00000260563 PDHA2P29803 388 aa20.21■□□□□ 0.83
RTCA-201ENST00000260563 IL2P60568 153 aa20.21■□□□□ 0.83
RTCA-201ENST00000260563 KIR2DS5Q14953 304 aa20.21■□□□□ 0.83
RTCA-201ENST00000260563 C14orf28Q4W4Y0 310 aa20.21■□□□□ 0.83
RTCA-201ENST00000260563 OGFOD3Q6PK18 319 aa20.21■□□□□ 0.83
RTCA-201ENST00000260563 SFTPA2Q8IWL1 248 aa20.21■□□□□ 0.83
RTCA-201ENST00000260563 GPR156Q8NFN8 814 aa20.21■□□□□ 0.83
RTCA-201ENST00000260563 CNDP2Q96KP4 475 aaKnown RBP20.21■□□□□ 0.83
RTCA-201ENST00000260563 RMDN2Q96LZ7 410 aa20.21■□□□□ 0.83
RTCA-201ENST00000260563 C12orf65Q9H3J6 166 aaKnown RBP20.21■□□□□ 0.83
RTCA-201ENST00000260563 EVA1BQ9NVM1 165 aa20.21■□□□□ 0.83
RTCA-201ENST00000260563 TMEM216Q9P0N5 145 aa20.21■□□□□ 0.83
RTCA-201ENST00000260563 SCHIP1Q9P0W5 487 aaPredicted RBP20.21■□□□□ 0.83
RTCA-201ENST00000260563 SLC17A7Q9P2U7 560 aa20.21■□□□□ 0.83
RTCA-201ENST00000260563 PTPRZ1P23471 2315 aaPredicted RBP20.2■□□□□ 0.82
RTCA-201ENST00000260563 POLR3GO15318 223 aaPredicted RBP20.2■□□□□ 0.82
RTCA-201ENST00000260563 CHN1P15882 459 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 RPIAP49247 311 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 KPNA2P52292 529 aaKnown RBP20.2■□□□□ 0.82
RTCA-201ENST00000260563 DAB2P98082 770 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 CLCA4Q14CN2 919 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 NR0B2Q15466 257 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 PROX2Q3B8N5 592 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 C16orf46Q6P387 395 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 IYDQ6PHW0 289 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 PDZD3Q86UT5 571 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 SLC22A15Q8IZD6 547 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 SFRP1Q8N474 314 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 BAHD1Q8TBE0 780 aaPredicted RBP20.2■□□□□ 0.82
RTCA-201ENST00000260563 MGARPQ8TDB4 240 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 SLC37A2Q8TED4 501 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 DENND1AQ8TEH3 1009 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 EEF1AKMT1Q8WVE0 214 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 LINGO1Q96FE5 620 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 C12orf66Q96MD2 445 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 CAMK1GQ96NX5 476 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 GPR78Q96P69 363 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 FAM111AQ96PZ2 611 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 UNKQ9C0B0 810 aaKnown RBP20.2■□□□□ 0.82
RTCA-201ENST00000260563 DERL2Q9GZP9 239 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 STN1Q9H668 368 aaKnown RBP20.2■□□□□ 0.82
RTCA-201ENST00000260563 NMRAL1Q9HBL8 299 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 CDYLQ9Y232 598 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 DMXL1Q9Y485 3027 aa20.2■□□□□ 0.82
RTCA-201ENST00000260563 OR52A4PA6NMU1 304 aa20.19■□□□□ 0.82
RTCA-201ENST00000260563 SLCO2B1O94956 709 aa20.19■□□□□ 0.82
RTCA-201ENST00000260563 LDOC1O95751 146 aaPredicted RBP20.19■□□□□ 0.82
RTCA-201ENST00000260563 TSPAN12O95859 305 aa20.19■□□□□ 0.82
RTCA-201ENST00000260563 CD1DP15813 335 aa20.19■□□□□ 0.82
RTCA-201ENST00000260563 GLRBP48167 497 aa20.19■□□□□ 0.82
RTCA-201ENST00000260563 RGS4P49798 205 aa20.19■□□□□ 0.82
RTCA-201ENST00000260563 MAZP56270 477 aaKnown RBP20.19■□□□□ 0.82
RTCA-201ENST00000260563 BIRC2Q13490 618 aa20.19■□□□□ 0.82
RTCA-201ENST00000260563 GBX1Q14549 363 aa20.19■□□□□ 0.82
RTCA-201ENST00000260563 CCDC153Q494R4 210 aa20.19■□□□□ 0.82
RTCA-201ENST00000260563 LRRC8EQ6NSJ5 796 aa20.19■□□□□ 0.82
RTCA-201ENST00000260563 KLC3Q6P597 504 aa20.19■□□□□ 0.82
RTCA-201ENST00000260563 PIP4P1Q86T03 277 aa20.19■□□□□ 0.82
RTCA-201ENST00000260563 SLC9B2Q86UD5 537 aa20.19■□□□□ 0.82
RTCA-201ENST00000260563 VRK3Q8IV63 474 aa20.19■□□□□ 0.82
RTCA-201ENST00000260563 TRIM48Q8IWZ4 208 aa20.19■□□□□ 0.82
RTCA-201ENST00000260563 AVL9Q8NBF6 648 aa20.19■□□□□ 0.82
RTCA-201ENST00000260563 SPDYE1Q8NFV5 336 aaPredicted RBP20.19■□□□□ 0.82
RTCA-201ENST00000260563 CXorf40BQ96DE9 158 aa20.19■□□□□ 0.82
RTCA-201ENST00000260563 SLC32A1Q9H598 525 aa20.19■□□□□ 0.82
RTCA-201ENST00000260563 IMP3Q9NV31 184 aaKnown RBP20.19■□□□□ 0.82
RTCA-201ENST00000260563 EMCNQ9ULC0 261 aa20.19■□□□□ 0.82
RTCA-201ENST00000260563 TRBV23OR9-2A0A075B6M9 112 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms