RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 MT-ND2P03891 347 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 ENO2P09104 434 aaPredicted RBP11.75□□□□□ -0.53
USHBP1-201ENST00000252597 AZGP1P25311 298 aaKnown RBP11.75□□□□□ -0.53
USHBP1-201ENST00000252597 ST13P50502 369 aaKnown RBP11.75□□□□□ -0.53
USHBP1-201ENST00000252597 CACHD1Q5VU97 1274 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 XAF1Q6GPH4 301 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 GOLGA7Q7Z5G4 137 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 ZDHHC21Q8IVQ6 265 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 SLC44A2Q8IWA5 706 aaPredicted RBP11.75□□□□□ -0.53
USHBP1-201ENST00000252597 ADHFE1Q8IWW8 467 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 MDGA1Q8NFP4 955 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 TRUB1Q8WWH5 349 aaKnown RBP11.75□□□□□ -0.53
USHBP1-201ENST00000252597 KATNAL1Q9BW62 490 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 CLPBQ9H078 707 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 GIN1Q9NXP7 522 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 RAI2Q9Y5P3 530 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 ZFP37Q9Y6Q3 630 aaPredicted RBP11.75□□□□□ -0.53
USHBP1-201ENST00000252597 PNMA8CA0A1B0GUJ8 204 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 HTR3EA5X5Y0 456 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 MGEA5O60502 916 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 EEDO75530 441 aaKnown RBP11.75□□□□□ -0.53
USHBP1-201ENST00000252597 NDST3O95803 873 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 VIPP01282 170 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 OPN1SWP03999 348 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 CD36P16671 472 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 RPL17P18621 184 aaKnown RBP11.75□□□□□ -0.53
USHBP1-201ENST00000252597 TNFRSF1BP20333 461 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 S100A3P33764 101 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 PSMD8P48556 350 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 SERPINB10P48595 397 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 CPT1AP50416 773 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 ZNF157P51786 506 aaPredicted RBP11.75□□□□□ -0.53
USHBP1-201ENST00000252597 EMX2Q04743 252 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 DOK6Q6PKX4 331 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 MON1AQ86VX9 555 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 CARNMT1Q8N4J0 409 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 PIK3C3Q8NEB9 887 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 SPPL2AQ8TCT8 520 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 MAGED4Q96JG8 741 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 EGLN2Q96KS0 407 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 DMRTB1Q96MA1 342 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 INPP5KQ9BT40 448 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 TPK1Q9H3S4 243 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 OPTCQ9UBM4 332 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 A0A0G2JMZ2 1700 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 SMIM30A4D0T7 59 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 PRMT5O14744 637 aaPredicted RBP11.74□□□□□ -0.53
USHBP1-201ENST00000252597 PGRP06401 933 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 RHOCP08134 193 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 UMPSP11172 480 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 HLA-DPA1P20036 260 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 ITPKAP23677 461 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 TMBIM6P55061 237 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 MRPS15P82914 257 aaKnown RBP11.74□□□□□ -0.53
USHBP1-201ENST00000252597 GSTM4Q03013 218 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 RSBN1Q5VWQ0 802 aaPredicted RBP11.74□□□□□ -0.53
USHBP1-201ENST00000252597 GDF6Q6KF10 455 aaPredicted RBP11.74□□□□□ -0.53
USHBP1-201ENST00000252597 SCML4Q8N228 414 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 NKAPQ8N5F7 415 aaKnown RBP11.74□□□□□ -0.53
USHBP1-201ENST00000252597 SELENOMQ8WWX9 145 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 ZNF583Q96ND8 569 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 CHCHD6Q9BRQ6 235 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 BBS2Q9BXC9 721 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 ASB8Q9H765 288 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 SLC6A13Q9NSD5 602 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 DNAJB9Q9UBS3 223 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 FCF1Q9Y324 198 aaKnown RBP11.74□□□□□ -0.53
USHBP1-201ENST00000252597 LCHNA4D1U4 455 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 LOC730098B7Z3J9 87 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 SLC25A14O95258 325 aaPredicted RBP11.74□□□□□ -0.53
USHBP1-201ENST00000252597 FGF4P08620 206 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 LPOP22079 712 aaPredicted RBP11.74□□□□□ -0.53
USHBP1-201ENST00000252597 ATP4BP51164 291 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 RPS3AP61247 264 aaKnown RBP11.74□□□□□ -0.53
USHBP1-201ENST00000252597 ADPRMQ3LIE5 342 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 ZFAND4Q86XD8 727 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 OR8H2Q8N162 312 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 PROX1Q92786 737 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 ALPK1Q96QP1 1244 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 PTPN18Q99952 460 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 RBM4BQ9BQ04 359 aaKnown RBP11.74□□□□□ -0.53
USHBP1-201ENST00000252597 RBM4Q9BWF3 364 aaKnown RBP11.74□□□□□ -0.53
USHBP1-201ENST00000252597 ATG10Q9H0Y0 220 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 RNF167Q9H6Y7 350 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 TRMT13Q9NUP7 481 aaKnown RBP11.74□□□□□ -0.53
USHBP1-201ENST00000252597 PAK1IP1Q9NWT1 392 aaPredicted RBP11.74□□□□□ -0.53
USHBP1-201ENST00000252597 HCSTQ9UBK5 93 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 CRLS1Q9UJA2 301 aa11.74□□□□□ -0.53
USHBP1-201ENST00000252597 AGO1Q9UL18 857 aaKnown RBP11.74□□□□□ -0.53
USHBP1-201ENST00000252597 TYW5A2RUC4 315 aaKnown RBP11.73□□□□□ -0.53
USHBP1-201ENST00000252597 SNPHO15079 494 aa11.73□□□□□ -0.53
USHBP1-201ENST00000252597 SH3BP5O60239 455 aa11.73□□□□□ -0.53
USHBP1-201ENST00000252597 VPS4BO75351 444 aa11.73□□□□□ -0.53
USHBP1-201ENST00000252597 PAPSS2O95340 614 aaPredicted RBP11.73□□□□□ -0.53
USHBP1-201ENST00000252597 MATN4O95460 622 aa11.73□□□□□ -0.53
USHBP1-201ENST00000252597 UGT2B4P06133 528 aa11.73□□□□□ -0.53
USHBP1-201ENST00000252597 TCEA1P23193 301 aaKnown RBP11.73□□□□□ -0.53
USHBP1-201ENST00000252597 HTR1EP28566 365 aa11.73□□□□□ -0.53
USHBP1-201ENST00000252597 DCTP40126 519 aa11.73□□□□□ -0.53
USHBP1-201ENST00000252597 ADAM17P78536 824 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms