RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 FAM83DQ9H4H8 585 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 SLC32A1Q9H598 525 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 PARVBQ9HBI1 364 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 PCDH12Q9NPG4 1184 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 KLHL42Q9P2K6 505 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 TBC1D14Q9P2M4 693 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 TRPS1Q9UHF7 1281 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 MYOCOSA0A1B0GUC4 107 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 SOCS2O14508 198 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 SEC22BO75396 215 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 FGF19O95750 216 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 BMP2P12643 396 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 IL10P22301 178 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 JAK1P23458 1154 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 MTPNP58546 118 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 MYBPC1Q00872 1141 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 KIAA0040Q15053 153 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 SPATS1Q496A3 300 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 IRAK1BP1Q5VVH5 260 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 IYDQ6PHW0 289 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 ZBTB49Q6ZSB9 765 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 TRIM46Q7Z4K8 759 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 LRRC3BQ96PB8 259 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 ACTR8Q9H981 624 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 FAM8A1Q9UBU6 413 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 LZTS1Q9Y250 596 aa21.2■□□□□ 0.98
CLN6-201ENST00000249806 SLC28A1O00337 649 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 PER2O15055 1255 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 HNRNPRO43390 633 aaKnown RBP21.19■□□□□ 0.98
CLN6-201ENST00000249806 PGM3O95394 542 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 CLDN9O95484 217 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 NPPAP01160 153 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 ENO2P09104 434 aaPredicted RBP21.19■□□□□ 0.98
CLN6-201ENST00000249806 TIMP2P16035 220 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 VARSP26640 1264 aaKnown RBP21.19■□□□□ 0.98
CLN6-201ENST00000249806 GGT5P36269 586 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 GNPDA1P46926 289 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 EEFSECP57772 596 aaKnown RBP21.19■□□□□ 0.98
CLN6-201ENST00000249806 OR4D2P58180 307 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 CAMK1Q14012 370 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 GBX1Q14549 363 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 DMC1Q14565 340 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 IMPG1Q17R60 797 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 PRSS36Q5K4E3 855 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 METTL2BQ6P1Q9 378 aaKnown RBP21.19■□□□□ 0.98
CLN6-201ENST00000249806 KIAA0907Q7Z7F0 614 aaPredicted RBP21.19■□□□□ 0.98
CLN6-201ENST00000249806 AHI1Q8N157 1196 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 LIX1Q8N485 282 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 CHCHD4Q8N4Q1 142 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 ANKFN1Q8N957 763 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 P2RY13Q9BPV8 354 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 EIF3LQ9Y262 564 aaKnown RBP21.19■□□□□ 0.98
CLN6-201ENST00000249806 A0A1W2PQ67 120 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 TCRBV5S2A0A599 114 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 DYTNA2CJ06 578 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 SAC3D1A6NKF1 404 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 ARNTLO00327 626 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 SYN1P17600 705 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 VIPR1P32241 457 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 LIN52Q52LA3 116 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 USP7Q93009 1102 aa21.19■□□□□ 0.98
CLN6-201ENST00000249806 OR2AG2A6NM03 316 aa21.18■□□□□ 0.98
CLN6-201ENST00000249806 NUAK1O60285 661 aa21.18■□□□□ 0.98
CLN6-201ENST00000249806 HIST1H2AGP0C0S8 130 aaPredicted RBP21.18■□□□□ 0.98
CLN6-201ENST00000249806 SMIM18P0DKX4 95 aa21.18■□□□□ 0.98
CLN6-201ENST00000249806 ZNF30P17039 623 aa21.18■□□□□ 0.98
CLN6-201ENST00000249806 HIST1H2ADP20671 130 aa21.18■□□□□ 0.98
CLN6-201ENST00000249806 SUSD1Q6UWL2 747 aa21.18■□□□□ 0.98
CLN6-201ENST00000249806 KRTCAP2Q8N6L1 136 aa21.18■□□□□ 0.98
CLN6-201ENST00000249806 ARMC5Q96C12 935 aa21.18■□□□□ 0.98
CLN6-201ENST00000249806 HIST1H2AHQ96KK5 128 aa21.18■□□□□ 0.98
CLN6-201ENST00000249806 TRAPPC9Q96Q05 1148 aa21.18■□□□□ 0.98
CLN6-201ENST00000249806 HIST1H2AJQ99878 128 aa21.18■□□□□ 0.98
CLN6-201ENST00000249806 H2AFJQ9BTM1 129 aa21.18■□□□□ 0.98
CLN6-201ENST00000249806 RIOK2Q9BVS4 552 aaKnown RBP21.18■□□□□ 0.98
CLN6-201ENST00000249806 SLC2A11Q9BYW1 496 aa21.18■□□□□ 0.98
CLN6-201ENST00000249806 LRTM1Q9HBL6 345 aa21.18■□□□□ 0.98
CLN6-201ENST00000249806 AGPAT4Q9NRZ5 378 aa21.18■□□□□ 0.98
CLN6-201ENST00000249806 WBP1LQ9NX94 342 aa21.18■□□□□ 0.98
CLN6-201ENST00000249806 FADS2P1A8MWK0 482 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 H0YJX3 145 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 PDLIM1O00151 329 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 SGTAO43765 313 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 WDR47O94967 919 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 PDYNP01213 254 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 CYP2A6P11509 494 aaPredicted RBP21.17■□□□□ 0.98
CLN6-201ENST00000249806 CEBPBP17676 345 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 HRH2P25021 359 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 NEK2P51955 445 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 PTCHD3Q3KNS1 767 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 FAM174BQ3ZCQ3 159 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 TMEM240Q5SV17 173 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 FBXO46Q6PJ61 603 aaPredicted RBP21.17■□□□□ 0.98
CLN6-201ENST00000249806 PLPP6Q8IY26 295 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 CLHC1Q8NHS4 586 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 SP7Q8TDD2 431 aaPredicted RBP21.17■□□□□ 0.98
CLN6-201ENST00000249806 CGREF1Q99674 301 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 FAM192AQ9GZU8 254 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 RPF2Q9H7B2 306 aaKnown RBP21.17■□□□□ 0.98
CLN6-201ENST00000249806 NEUROG3Q9Y4Z2 214 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms