RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 KRTCAP2Q8N6L1 136 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 OR8J3Q8NGG0 315 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 MTFMTQ96DP5 389 aaKnown RBP19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 ASIC4Q96FT7 647 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 IKZF5Q9H5V7 419 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 SOX17Q9H6I2 414 aaPredicted RBP19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 NTN4Q9HB63 628 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 SMPD3Q9NY59 655 aaPredicted RBP19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 ZDHHC3Q9NYG2 299 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 ZNHIT2Q9UHR6 403 aa19.13■□□□□ 0.65
CDC42EP1-201ENST00000249014 STK16O75716 305 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 LAG3P18627 525 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 RPS9P46781 194 aaKnown RBP19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 GNPDA1P46926 289 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 PRMT2P55345 433 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 SH3BGRP55822 239 aaPredicted RBP19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 SNRPD1P62314 119 aaKnown RBP19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 TTLL9Q3SXZ7 439 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 KCTD21Q4G0X4 260 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 LRRC73Q5JTD7 316 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 SPANXN4Q5MJ08 99 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 METTL3Q86U44 580 aaKnown RBP19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 OSCP1Q8WVF1 389 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 USP7Q93009 1102 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 SUV39H2Q9H5I1 410 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 LRTM1Q9HBL6 345 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 C8orf4Q9NR00 106 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 KCTD5Q9NXV2 234 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 ZNF510Q9Y2H8 683 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 LEFTY2O00292 366 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 SEC22BO75396 215 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 WDR47O94967 919 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 SNAP29O95721 258 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 GGT5P36269 586 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 RPIAP49247 311 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 RBBP5Q15291 538 aaKnown RBP19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 CRY1Q16526 586 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 C22orf39Q6P5X5 142 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 MSRB3Q8IXL7 192 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 OFCC1Q8IZS5 231 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 ULK4Q96C45 1275 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 DPY30Q9C005 99 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 DDX18Q9NVP1 670 aaKnown RBP19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 SLC25A37Q9NYZ2 338 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 PDE10AQ9Y233 779 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 FADS3Q9Y5Q0 445 aa19.12■□□□□ 0.65
CDC42EP1-201ENST00000249014 UPK1AO00322 258 aa19.11■□□□□ 0.65
CDC42EP1-201ENST00000249014 BMP10O95393 424 aa19.11■□□□□ 0.65
CDC42EP1-201ENST00000249014 MAD2L1Q13257 205 aaPredicted RBP19.11■□□□□ 0.65
CDC42EP1-201ENST00000249014 IMPG1Q17R60 797 aa19.11■□□□□ 0.65
CDC42EP1-201ENST00000249014 SMU1Q2TAY7 513 aa19.11■□□□□ 0.65
CDC42EP1-201ENST00000249014 C11orf91Q3C1V1 193 aa19.11■□□□□ 0.65
CDC42EP1-201ENST00000249014 METTL2BQ6P1Q9 378 aaKnown RBP19.11■□□□□ 0.65
CDC42EP1-201ENST00000249014 FAM86B1Q8N7N1 296 aa19.11■□□□□ 0.65
CDC42EP1-201ENST00000249014 ZBTB18Q99592 522 aa19.11■□□□□ 0.65
CDC42EP1-201ENST00000249014 COPS8Q99627 209 aa19.11■□□□□ 0.65
CDC42EP1-201ENST00000249014 CARS2Q9HA77 564 aaKnown RBP19.11■□□□□ 0.65
CDC42EP1-201ENST00000249014 TBX21Q9UL17 535 aa19.11■□□□□ 0.65
CDC42EP1-201ENST00000249014 PPIL1Q9Y3C6 166 aa19.11■□□□□ 0.65
CDC42EP1-201ENST00000249014 TRIM64A6NGJ6 449 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 CLOCKO15516 846 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 PGRP06401 933 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 ANXA6P08133 673 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 ANXA5P08758 320 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 CBSLP0DN79 551 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 NFKBIAP25963 317 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 CBSP35520 551 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 CAPGP40121 348 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 MNX1P50219 401 aaPredicted RBP19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 PTPN5P54829 565 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 CPSF6Q16630 551 aaKnown RBP eCLIP19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 MAPKAPK3Q16644 382 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 SLC44A4Q53GD3 710 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 USP39Q53GS9 565 aaKnown RBP19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 ASTLQ6HA08 431 aaPredicted RBP19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 TMEM214Q6NUQ4 689 aaKnown RBP19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 DNAJC14Q6Y2X3 702 aaPredicted RBP19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 USP45Q70EL2 814 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 DHRSXQ8N5I4 330 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 OR10A6Q8NH74 314 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 CLHC1Q8NHS4 586 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 ITFG1Q8TB96 612 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 BDH2Q9BUT1 245 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 SLC46A2Q9BY10 475 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 ACPTQ9BZG2 426 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 RNF208Q9H0X6 261 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 CLMPQ9H6B4 373 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 ZDHHC6Q9H6R6 413 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 ARL15Q9NXU5 204 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 TMPRSS11EQ9UL52 423 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 HS3ST2Q9Y278 367 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 HELZP42694 1942 aaKnown RBP19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 TRAV19A0A0A6YYK7 116 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 TRIM64CA6NLI5 447 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 AREL1O15033 823 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 CLDN9O95484 217 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 PCNAP12004 261 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 AKT1P31749 480 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 ARHGEF6Q15052 776 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 DPY19L3Q6ZPD9 716 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms