RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 SLC7A5P1Q8MH63 180 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 LGI2Q8N0V4 545 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 THEM5Q8N1Q8 247 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 ATAD1Q8NBU5 361 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 NCLNQ969V3 563 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 VMP1Q96GC9 406 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 EPS8L2Q9H6S3 715 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 IPPKQ9H8X2 491 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 ELOVL2Q9NXB9 296 aa12.17□□□□□ -0.46
NUP88-201ENST00000225696 SCHIP1Q9P0W5 487 aaPredicted RBP12.17□□□□□ -0.46
NUP88-201ENST00000225696 ZBBXA8MT70 800 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 BCKDKO14874 412 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 VPS26AO75436 327 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 GMNNO75496 209 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 CREG1O75629 220 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 PRAMEF12O95522 483 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 ANGPTL1O95841 491 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 MYCLP1P12525 358 aaPredicted RBP12.16□□□□□ -0.46
NUP88-201ENST00000225696 ITGB6P18564 788 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 RCVRNP35243 200 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 HSPA7P48741 367 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 IL1RL1Q01638 556 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 SLC13A2Q13183 592 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 GTF2H2Q13888 395 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 MAPRE1Q15691 268 aaKnown RBP12.16□□□□□ -0.46
NUP88-201ENST00000225696 NPTX1Q15818 432 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 MAPKAPK3Q16644 382 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 PARP15Q460N3 678 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 ZRANB3Q5FWF4 1079 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 GTF2H2CQ6P1K8 395 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 SBSNQ6UWP8 590 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 EFL1Q7Z2Z2 1120 aaKnown RBP12.16□□□□□ -0.46
NUP88-201ENST00000225696 ZNF551Q7Z340 670 aaPredicted RBP12.16□□□□□ -0.46
NUP88-201ENST00000225696 MRPL10Q7Z7H8 261 aaKnown RBP12.16□□□□□ -0.46
NUP88-201ENST00000225696 SLC22A15Q8IZD6 547 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 EFHBQ8N7U6 833 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 ARL10Q8N8L6 244 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 LPCAT1Q8NF37 534 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 RDH12Q96NR8 316 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 PTPN18Q99952 460 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 DCAF13Q9NV06 445 aaKnown RBP12.16□□□□□ -0.46
NUP88-201ENST00000225696 POU2F3Q9UKI9 436 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 PADI3Q9ULW8 664 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 TRPV2Q9Y5S1 764 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 GPC6Q9Y625 555 aaPredicted RBP12.16□□□□□ -0.46
NUP88-201ENST00000225696 SLC12A8A0AV02 714 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 GRXCR2A6NFK2 248 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 M0R3G1 203 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 TAPBPO15533 448 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 OXSR1O95747 527 aaPredicted RBP12.16□□□□□ -0.46
NUP88-201ENST00000225696 FADS2O95864 444 aaKnown RBP12.16□□□□□ -0.46
NUP88-201ENST00000225696 PGRP06401 933 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 CLK3P49761 638 aaKnown RBP12.16□□□□□ -0.46
NUP88-201ENST00000225696 CLCN7P51798 805 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 VAC14Q08AM6 782 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 SLC14A1Q13336 389 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 KCNJ8Q15842 424 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 C10orf120Q5SQS8 335 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 CES5AQ6NT32 575 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 SLC22A16Q86VW1 577 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 ANKRD46Q86W74 232 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 ZNF280BQ86YH2 543 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 SVOPLQ8N434 492 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 LIX1Q8N485 282 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 OR6Q1Q8NGQ2 317 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 DYNC2LI1Q8TCX1 351 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 FBLIM1Q8WUP2 373 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 PYCR2Q96C36 320 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 YIPF6Q96EC8 236 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 SUSD3Q96L08 255 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 ZNF300Q96RE9 604 aaPredicted RBP12.16□□□□□ -0.46
NUP88-201ENST00000225696 PSD2Q9BQI7 771 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 SPON2Q9BUD6 331 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 KAT8Q9H7Z6 458 aaKnown RBP12.16□□□□□ -0.46
NUP88-201ENST00000225696 MARCH2Q9P0N8 246 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 ABCG2Q9UNQ0 655 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 PKP3Q9Y446 797 aa12.16□□□□□ -0.46
NUP88-201ENST00000225696 GLTPD2A6NH11 291 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 TTC36A6NLP5 189 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 TTC34A8MYJ7 566 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 M0QZ92 97 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 SLC16A6O15403 523 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 KDM1AO60341 852 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 TLR5O60602 858 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 SLC6A4P31645 630 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 CPT1AP50416 773 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 SLC35A2P78381 396 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 SELENBP1Q13228 472 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 TUSC3Q13454 348 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 TAF1AQ15573 450 aaPredicted RBP12.15□□□□□ -0.46
NUP88-201ENST00000225696 RUNDC3AQ59EK9 446 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 CXCL17Q6UXB2 119 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 TTC30BQ8N4P2 665 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 ATP6V0D2Q8N8Y2 350 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 PIK3C3Q8NEB9 887 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 OR5K1Q8NHB7 308 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 RORBQ92753 470 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 MTFMTQ96DP5 389 aaKnown RBP12.15□□□□□ -0.46
NUP88-201ENST00000225696 SLX1AQ9BQ83 275 aa12.15□□□□□ -0.46
NUP88-201ENST00000225696 MGME1Q9BQP7 344 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms