RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 NKX6-1P78426 367 aaPredicted RBP10.9□□□□□ -0.66
USP31-201ENST00000219689 IRF9Q00978 393 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 DYRK1AQ13627 763 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 KCNJ8Q15842 424 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 XKR6Q5GH73 641 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 CFAP77Q6ZQR2 320 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 AURKBQ96GD4 344 aaPredicted RBP10.9□□□□□ -0.66
USP31-201ENST00000219689 ZNF696Q9H7X3 374 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 NBASA2RRP1 2371 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 F9P00740 461 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 UBAP2Q5T6F2 1119 aaKnown RBP10.9□□□□□ -0.66
USP31-201ENST00000219689 SH3PXD2AQ5TCZ1 1133 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 CIDECQ96AQ7 238 aaPredicted RBP10.9□□□□□ -0.66
USP31-201ENST00000219689 AGAP2Q99490 1192 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 ARL6Q9H0F7 186 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 DNAJB9Q9UBS3 223 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 RBM7Q9Y580 266 aaKnown RBP10.9□□□□□ -0.66
USP31-201ENST00000219689 ZNF536O15090 1300 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 VWDEQ8N2E2 1590 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 BUD23O43709 281 aaKnown RBP10.9□□□□□ -0.66
USP31-201ENST00000219689 AOC1P19801 751 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 UBA1P22314 1058 aaKnown RBP10.9□□□□□ -0.66
USP31-201ENST00000219689 RENBPP51606 427 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 ZNF143P52747 638 aaPredicted RBP10.9□□□□□ -0.66
USP31-201ENST00000219689 TROAPQ12815 778 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 DOK6Q6PKX4 331 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 BRINP3Q76B58 766 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 KCTD9Q7L273 389 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 SNX33Q8WV41 574 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 SCRN2Q96FV2 425 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 GPER1Q99527 375 aa10.9□□□□□ -0.66
USP31-201ENST00000219689 INMT-MINDY4F8WBC2 141 aa10.9□□□□□ -0.67
USP31-201ENST00000219689 MAP2K3P46734 347 aa10.9□□□□□ -0.67
USP31-201ENST00000219689 SLC11A2P49281 568 aa10.9□□□□□ -0.67
USP31-201ENST00000219689 LRRC66Q68CR7 880 aa10.9□□□□□ -0.67
USP31-201ENST00000219689 VTCN1Q7Z7D3 282 aa10.9□□□□□ -0.67
USP31-201ENST00000219689 UNC5BQ8IZJ1 945 aa10.9□□□□□ -0.67
USP31-201ENST00000219689 RBCK1Q9BYM8 510 aa10.9□□□□□ -0.67
USP31-201ENST00000219689 MYO16Q9Y6X6 1858 aa10.9□□□□□ -0.67
USP31-201ENST00000219689 ADAMDEC1O15204 470 aa10.9□□□□□ -0.67
USP31-201ENST00000219689 SLC3A1Q07837 685 aa10.9□□□□□ -0.67
USP31-201ENST00000219689 SP140Q13342 867 aa10.9□□□□□ -0.67
USP31-201ENST00000219689 LRRC55Q6ZSA7 311 aa10.9□□□□□ -0.67
USP31-201ENST00000219689 C7orf34Q96L11 122 aa10.9□□□□□ -0.67
USP31-201ENST00000219689 C1orf109Q9NX04 203 aa10.9□□□□□ -0.67
USP31-201ENST00000219689 FSCN2O14926 492 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 DENRO43583 198 aaKnown RBP10.89□□□□□ -0.67
USP31-201ENST00000219689 BCAS2O75934 225 aaPredicted RBP10.89□□□□□ -0.67
USP31-201ENST00000219689 STAG3L1P0CL83 205 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 FGFR1P11362 822 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 TKTL1P51854 596 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 LNX2Q8N448 690 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 PNMA5Q96PV4 448 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 EBPLQ9BY08 206 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 HECW2Q9P2P5 1572 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 E5RJQ4 531 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 SULT1B1O43704 296 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 NME6O75414 186 aaPredicted RBP10.89□□□□□ -0.67
USP31-201ENST00000219689 UPK1BO75841 260 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 TAL1P17542 331 aaPredicted RBP10.89□□□□□ -0.67
USP31-201ENST00000219689 PTPN6P29350 595 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 PNPLA4P41247 253 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 GK2Q14410 553 aaPredicted RBP10.89□□□□□ -0.67
USP31-201ENST00000219689 DSC3Q14574 896 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 CPSF6Q16630 551 aaKnown RBP eCLIP10.89□□□□□ -0.67
USP31-201ENST00000219689 PIGGQ5H8A4 983 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 CHRAC1Q9NRG0 131 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 CA5BQ9Y2D0 317 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 SNAPC5O75971 98 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 SETMARQ53H47 684 aaPredicted RBP10.89□□□□□ -0.67
USP31-201ENST00000219689 CMPK2Q5EBM0 449 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 FBXO48Q5FWF7 155 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 PIWIL1Q96J94 861 aaKnown RBP10.89□□□□□ -0.67
USP31-201ENST00000219689 ASPNQ9BXN1 380 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 SIAEQ9HAT2 523 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 ZBTB20Q9HC78 741 aaPredicted RBP10.89□□□□□ -0.67
USP31-201ENST00000219689 SLC17A6Q9P2U8 582 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 TISP43B9A030 160 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 XKP51811 444 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 TAGLNQ01995 201 aaKnown RBP10.89□□□□□ -0.67
USP31-201ENST00000219689 TRIM28Q13263 835 aaKnown RBP10.89□□□□□ -0.67
USP31-201ENST00000219689 CERCAMQ5T4B2 595 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 TDRD10Q5VZ19 366 aaKnown RBP10.89□□□□□ -0.67
USP31-201ENST00000219689 GPR180Q86V85 440 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 ATCAYQ86WG3 371 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 DCBLD1Q8N8Z6 715 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 SEC14L3Q9UDX4 400 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 PPP1R8Q12972 351 aaKnown RBP10.89□□□□□ -0.67
USP31-201ENST00000219689 AKR1C8PQ5T2L2 129 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 SLC15A3Q8IY34 581 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 OR6J1Q8NGC5 347 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 PRICKLE1Q96MT3 831 aaPredicted RBP10.89□□□□□ -0.67
USP31-201ENST00000219689 LGMNQ99538 433 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 RC3H2Q9HBD1 1191 aaKnown RBP10.89□□□□□ -0.67
USP31-201ENST00000219689 NECTIN3Q9NQS3 549 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 ANKMY1Q9P2S6 941 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 COL15A1P39059 1388 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 SETBP1Q9Y6X0 1596 aa10.89□□□□□ -0.67
USP31-201ENST00000219689 ZNF7P17097 686 aaPredicted RBP10.89□□□□□ -0.67
USP31-201ENST00000219689 NDUFAF5Q5TEU4 345 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms