RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 GNPDA1P46926 289 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 RING1Q06587 406 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 CCNIQ14094 377 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 PTGR1Q14914 329 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 ARMC3Q5W041 872 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 PPP4R4Q6NUP7 873 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 B3GNT6Q6ZMB0 384 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 HMGB4Q8WW32 186 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 OR8D1Q8WZ84 308 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 UGT2B28Q9BY64 529 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 DDX28Q9NUL7 540 aaKnown RBP11.84□□□□□ -0.51
CHPF2-201ENST00000035307 CHCHD3Q9NX63 227 aaKnown RBP11.84□□□□□ -0.51
CHPF2-201ENST00000035307 FBXO10Q9UK96 956 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 SH3GLB1Q9Y371 365 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 SAMHD1Q9Y3Z3 626 aaKnown RBP11.84□□□□□ -0.51
CHPF2-201ENST00000035307 CACNA1CQ13936 2221 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 GPR179Q6PRD1 2367 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 HMX2A2RU54 273 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 ERAL1O75616 437 aaKnown RBP11.84□□□□□ -0.51
CHPF2-201ENST00000035307 FUT4P22083 530 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 ARF5P84085 180 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 MS4A2Q01362 244 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 MYLK3Q32MK0 819 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 CARD16Q5EG05 197 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 BHLHA9Q7RTU4 235 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 RGL4Q8IZJ4 473 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 C2CD4AQ8NCU7 369 aaPredicted RBP11.84□□□□□ -0.51
CHPF2-201ENST00000035307 OR52B6Q8NGF0 335 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 PGAP3Q96FM1 320 aaPredicted RBP11.84□□□□□ -0.51
CHPF2-201ENST00000035307 HERC2P3Q9BVR0 1158 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 OR2AG1Q9H205 316 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 MFSD1Q9H3U5 465 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 IMP3Q9NV31 184 aaKnown RBP11.84□□□□□ -0.51
CHPF2-201ENST00000035307 NDUFA13Q9P0J0 144 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 RAPGEFL1Q9UHV5 662 aa11.84□□□□□ -0.51
CHPF2-201ENST00000035307 LDB2O43679 373 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 KDM1AO60341 852 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 CHRM5P08912 532 aaPredicted RBP11.83□□□□□ -0.52
CHPF2-201ENST00000035307 PREPP48147 710 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 HK2P52789 917 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 CHIT1Q13231 466 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 TRIM16LQ309B1 348 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 ZBTB2Q8N680 514 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 RTP4Q96DX8 246 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 REXO5Q96IC2 774 aaKnown RBP11.83□□□□□ -0.52
CHPF2-201ENST00000035307 CHID1Q9BWS9 393 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 C6orf62Q9GZU0 229 aaPredicted RBP11.83□□□□□ -0.52
CHPF2-201ENST00000035307 CTPS2Q9NRF8 586 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 F11P03951 625 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 ASGR2P07307 311 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 ANXA6P08133 673 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 PRKACGP22612 351 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 MAPK1P28482 360 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 IFNA8P32881 189 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 FOXA1P55317 472 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 TP53BP2Q13625 1128 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 PRAMEF14Q5SWL7 426 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 VITQ6UXI7 678 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 C8orf59Q8N0T1 100 aaPredicted RBP11.83□□□□□ -0.52
CHPF2-201ENST00000035307 ADCY4Q8NFM4 1077 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 TNIP2Q8NFZ5 429 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 ACDQ96AP0 544 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 TSGA13Q96PP4 275 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 DHRS4Q9BTZ2 278 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 FZD3Q9NPG1 666 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 ANKDD1BA6NHY2 528 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 FOXD2O60548 495 aaPredicted RBP11.83□□□□□ -0.52
CHPF2-201ENST00000035307 SNNO75324 88 aaPredicted RBP11.83□□□□□ -0.52
CHPF2-201ENST00000035307 VPS4BO75351 444 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 G6PDP11413 515 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 DDX5P17844 614 aaKnown RBP11.83□□□□□ -0.52
CHPF2-201ENST00000035307 DNAJB1P25685 340 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 STC1P52823 247 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 NR1H2P55055 460 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 UAP1L1Q3KQV9 507 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 RANBP10Q6VN20 620 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 GDPD4Q6W3E5 623 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 ZFRQ96KR1 1074 aaKnown RBP11.83□□□□□ -0.52
CHPF2-201ENST00000035307 ZBP1Q9H171 429 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 SNX6Q9UNH7 406 aa11.83□□□□□ -0.52
CHPF2-201ENST00000035307 SCN10AQ9Y5Y9 1956 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.82□□□□□ -0.52
CHPF2-201ENST00000035307 TOR1BO14657 336 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 HOXD9P28356 352 aaPredicted RBP11.82□□□□□ -0.52
CHPF2-201ENST00000035307 PRDX3P30048 256 aaKnown RBP11.82□□□□□ -0.52
CHPF2-201ENST00000035307 TRPC1P48995 793 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 ITGADQ13349 1161 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 UBXN2BQ14CS0 331 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 OR4D1Q15615 310 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 TNFAIP8L3Q5GJ75 292 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 ANKRD26P1Q6NSI1 321 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 DDHD1Q8NEL9 900 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 ZNF483Q8TF39 744 aaPredicted RBP11.82□□□□□ -0.52
CHPF2-201ENST00000035307 LRRC42Q9Y546 428 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 ANTXRLA6NF34 631 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 S1PR4O95977 384 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 CXCL10P02778 98 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 GABRB3P28472 473 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 SPAM1P38567 509 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 CACNG1Q06432 222 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms