RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 SLC22A15Q8IZD6 547 aa13.99□□□□□ -0.17
RTFDC1-201ENST00000023939 SFRP1Q8N474 314 aa13.99□□□□□ -0.17
RTFDC1-201ENST00000023939 FGF14Q92915 247 aa13.99□□□□□ -0.17
RTFDC1-201ENST00000023939 USP7Q93009 1102 aa13.99□□□□□ -0.17
RTFDC1-201ENST00000023939 TMEM159Q96B96 161 aa13.99□□□□□ -0.17
RTFDC1-201ENST00000023939 LINC00615Q96LM1 132 aaPredicted RBP13.99□□□□□ -0.17
RTFDC1-201ENST00000023939 PPP3R2Q96LZ3 170 aa13.99□□□□□ -0.17
RTFDC1-201ENST00000023939 S100A14Q9HCY8 104 aa13.99□□□□□ -0.17
RTFDC1-201ENST00000023939 BCAP29Q9UHQ4 241 aa13.99□□□□□ -0.17
RTFDC1-201ENST00000023939 DYTNA2CJ06 578 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 LSM1O15116 133 aaKnown RBP13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 LZTS3O60299 673 aaPredicted RBP13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 MMP20O60882 483 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 CLDN9O95484 217 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 ME2P23368 584 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 RCAN2Q14206 197 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 CCDC6Q16204 474 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 SYTL3Q4VX76 610 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 TMEM220Q6QAJ8 160 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 MTSS1LQ765P7 747 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 GALNT13Q8IUC8 556 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 BEND7Q8N7W2 519 aaPredicted RBP13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 DCBLD1Q8N8Z6 715 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 L3MBTL4Q8NA19 623 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 FBXO15Q8NCQ5 510 aaPredicted RBP13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 CXorf40AQ8TE69 158 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 SKA2Q8WVK7 121 aaPredicted RBP13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 CCDC124Q96CT7 223 aaKnown RBP13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 P2RY13Q9BPV8 354 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 TRIM39Q9HCM9 518 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 C17orf113A0A1B0GUU1 675 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 GRXCR2A6NFK2 248 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 TMEM202A6NGA9 273 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 LOC730098B7Z3J9 87 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 PLK4O00444 970 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 MANBAO00462 879 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 TRIM38O00635 465 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 LIN7AO14910 233 aaPredicted RBP13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 INPP4BO15327 924 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 RGS14O43566 566 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 VEGFDO43915 354 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 SYNCRIPO60506 623 aaKnown RBP13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 SORBS2O94875 1100 aaKnown RBP13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 ANPEPP15144 967 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 BMP8BP34820 402 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 ARL1P40616 181 aaPredicted RBP13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 GPR1P46091 355 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 MLLT1Q03111 559 aaPredicted RBP13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 FOXM1Q08050 763 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 PCDH1Q08174 1060 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 CNTN1Q12860 1018 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 ABRAXAS2Q15018 415 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 AGERQ15109 404 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 SPATS1Q496A3 300 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 PRMT9Q6P2P2 845 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 SCIMPQ6UWF3 145 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 ADAMTSL4Q6UY14 1074 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 KBTBD6Q86V97 674 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 RETREG3Q86VR2 466 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 ATL1Q8WXF7 558 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 HOPXQ9BPY8 73 aaPredicted RBP13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 GPATCH1Q9BRR8 931 aaKnown RBP13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 SPAG4Q9NPE6 437 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 ASIC5Q9NY37 505 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 MAP10Q9P2G4 905 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 EPS15L1Q9UBC2 864 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 SUCOQ9UBS9 1254 aaKnown RBP13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 CROTQ9UKG9 612 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 GPR34Q9UPC5 381 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 COQ6Q9Y2Z9 468 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 RNF11Q9Y3C5 154 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 LRRC42Q9Y546 428 aa13.98□□□□□ -0.17
RTFDC1-201ENST00000023939 KCNE1BA0A087WTH5 132 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 A0A1W2PP18 115 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 SERTM1A2A2V5 107 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 ARHGEF33A8MVX0 844 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 NPIPB8E9PQR5 432 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 NR5A2O00482 541 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 ACOT8O14734 319 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 CFLARO15519 480 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 ULK1O75385 1050 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 SLC22A3O75751 556 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 BCAS2O75934 225 aaPredicted RBP13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 ADH1BP00325 375 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 KRT6AP02538 564 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 CATP04040 527 aaKnown RBP13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 KRT6BP04259 564 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 PCSK2P16519 638 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 CAPN3P20807 821 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 DRD3P35462 400 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 VHLP40337 213 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 ZFP36L2P47974 494 aaKnown RBP13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 KRT6CP48668 564 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 PLOD1Q02809 727 aaPredicted RBP13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 ZNF33BQ06732 778 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 PTCHD3Q3KNS1 767 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 RAET1GQ6H3X3 334 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 MINDY1Q8N5J2 469 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 EFCAB3Q8N7B9 438 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 FNDC5Q8NAU1 212 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms