RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 BTBD3Q9Y2F9 522 aa21.08■□□□□ 0.97
TSPAN9-208ENST00000640568 HMX2A2RU54 273 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 NOBOXO60393 691 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 MPC1LP0DKB6 136 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 KRT15P19012 456 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 LIMK1P53667 647 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 DAB2P98082 770 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 ABRQ12979 859 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 DNAJC3Q13217 504 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 CASP8Q14790 479 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 NR0B2Q15466 257 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 RPE65Q16518 533 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 KRT71Q3SY84 523 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 CAPRIN2Q6IMN6 1127 aaKnown RBP21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 OGFOD3Q6PK18 319 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 NEK10Q6ZWH5 1172 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 CROCCP2Q86T23 111 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 SFRP1Q8N474 314 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 FAM181AQ8N9Y4 354 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 GPR156Q8NFN8 814 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 NETO1Q8TDF5 533 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 EEF1AKMT1Q8WVE0 214 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 TFGQ92734 400 aaPredicted RBP21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 COLEC10Q9Y6Z7 277 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 FAM186AA6NE01 2351 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 GOLGA4Q13439 2230 aaKnown RBP21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 COL5A1P20908 1838 aaPredicted RBP21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 ZFHX2Q9C0A1 2572 aaPredicted RBP21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 SH3BP5O60239 455 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 RPN2P04844 631 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 MTHFD1P11586 935 aaKnown RBP21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 MAPK9P45984 424 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 MAZP56270 477 aaKnown RBP21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 RASA2Q15283 850 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 LRIG3Q6UXM1 1119 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 CCDC91Q7Z6B0 441 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 TBC1D1Q86TI0 1168 aaPredicted RBP21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 SFTPA2Q8IWL1 248 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 SLC35F3Q8IY50 421 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 FAM122AQ96E09 287 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 CNDP2Q96KP4 475 aaKnown RBP21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 FERD3LQ96RJ6 166 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 POT1Q9NUX5 634 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 CPNE7Q9UBL6 633 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 FTSJ1Q9UET6 329 aa21.07■□□□□ 0.96
TSPAN9-208ENST00000640568 A0A087X1B8 175 aa21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 A0A096LPK6 155 aa21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 LDOC1O95751 146 aaPredicted RBP21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 ALDOAP04075 364 aaKnown RBP21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 XRCC1P18887 633 aaPredicted RBP21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 NDUFS1P28331 727 aa21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 DUSP3P51452 185 aaPredicted RBP21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 HHEXQ03014 270 aa21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 CEP85LQ5SZL2 805 aa21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 DUS1LQ6P1R4 473 aaKnown RBP21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 TTC23LQ6PF05 361 aa21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 UNC5DQ6UXZ4 953 aa21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 PIWIL4Q7Z3Z4 852 aaKnown RBP21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 IQCKQ8N0W5 287 aa21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 ARL14Q8N4G2 192 aa21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 TMEM109Q9BVC6 243 aa21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 VPS11Q9H270 941 aa21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 TRIT1Q9H3H1 467 aaKnown RBP21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 ZNF624Q9P2J8 865 aaPredicted RBP21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 ACOT9Q9Y305 439 aa21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 NFS1Q9Y697 457 aa21.06■□□□□ 0.96
TSPAN9-208ENST00000640568 ANKRD12Q6UB98 2062 aa21.05■□□□□ 0.96
TSPAN9-208ENST00000640568 RIF1Q5UIP0 2472 aaKnown RBP21.05■□□□□ 0.96
TSPAN9-208ENST00000640568 MT-ND3P03897 115 aa21.05■□□□□ 0.96
TSPAN9-208ENST00000640568 MPOP05164 745 aa21.05■□□□□ 0.96
TSPAN9-208ENST00000640568 C2P06681 752 aa21.05■□□□□ 0.96
TSPAN9-208ENST00000640568 CCDC166P0CW27 439 aa21.05■□□□□ 0.96
TSPAN9-208ENST00000640568 ACADLP28330 430 aa21.05■□□□□ 0.96
TSPAN9-208ENST00000640568 SLC19A1P41440 591 aa21.05■□□□□ 0.96
TSPAN9-208ENST00000640568 ZNF844Q08AG5 666 aa21.05■□□□□ 0.96
TSPAN9-208ENST00000640568 TMEM207Q6UWW9 146 aa21.05■□□□□ 0.96
TSPAN9-208ENST00000640568 HDXQ7Z353 690 aa21.05■□□□□ 0.96
TSPAN9-208ENST00000640568 SPNS2Q8IVW8 549 aa21.05■□□□□ 0.96
TSPAN9-208ENST00000640568 OR6C4Q8NGE1 309 aa21.05■□□□□ 0.96
TSPAN9-208ENST00000640568 ISL2Q96A47 359 aa21.05■□□□□ 0.96
TSPAN9-208ENST00000640568 CABS1Q96KC9 395 aa21.05■□□□□ 0.96
TSPAN9-208ENST00000640568 TSNARE1Q96NA8 513 aa21.05■□□□□ 0.96
TSPAN9-208ENST00000640568 MVB12BQ9H7P6 319 aa21.05■□□□□ 0.96
TSPAN9-208ENST00000640568 PADI4Q9UM07 663 aa21.05■□□□□ 0.96
TSPAN9-208ENST00000640568 PABPN1LA6NDY0 278 aaKnown RBP21.04■□□□□ 0.96
TSPAN9-208ENST00000640568 RHPN2P1A8MT19 583 aa21.04■□□□□ 0.96
TSPAN9-208ENST00000640568 SLC35E2BP0CK96 405 aa21.04■□□□□ 0.96
TSPAN9-208ENST00000640568 CSHL1Q14406 222 aa21.04■□□□□ 0.96
TSPAN9-208ENST00000640568 TIFABQ6ZNK6 161 aa21.04■□□□□ 0.96
TSPAN9-208ENST00000640568 C17orf82Q86X59 251 aaPredicted RBP21.04■□□□□ 0.96
TSPAN9-208ENST00000640568 RBM12BQ8IXT5 1001 aaKnown RBP21.04■□□□□ 0.96
TSPAN9-208ENST00000640568 TBC1D21Q8IYX1 336 aa21.04■□□□□ 0.96
TSPAN9-208ENST00000640568 MAGEC3Q8TD91 643 aa21.04■□□□□ 0.96
TSPAN9-208ENST00000640568 SH3KBP1Q96B97 665 aa21.04■□□□□ 0.96
TSPAN9-208ENST00000640568 CENPHQ9H3R5 247 aa21.04■□□□□ 0.96
TSPAN9-208ENST00000640568 RUVBL2Q9Y230 463 aaKnown RBP21.04■□□□□ 0.96
TSPAN9-208ENST00000640568 GOLGA6L10A6NI86 522 aa21.03■□□□□ 0.96
TSPAN9-208ENST00000640568 KDM1AO60341 852 aa21.03■□□□□ 0.96
TSPAN9-208ENST00000640568 CATP04040 527 aaKnown RBP21.03■□□□□ 0.96
TSPAN9-208ENST00000640568 MYF5P13349 255 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms