RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 CLDN9O95484 217 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 TIMP1P01033 207 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 IL6P05231 212 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 MPC1LP0DKB6 136 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 SMIM18P0DKX4 95 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 CSF2RAP15509 400 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 ZNF30P17039 623 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 RPIAP49247 311 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 HNMTP50135 292 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 SP140Q13342 867 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 ARHGEF7Q14155 803 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 RABL3Q5HYI8 236 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 IYDQ6PHW0 289 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 FKBP9P1Q75LS8 142 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 CARM1Q86X55 608 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 KIAA2013Q8IYS2 634 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 CMTM8Q8IZV2 173 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 DNAJC5GQ8N7S2 189 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 NAT14Q8WUY8 206 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 NCSTNQ92542 709 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 LMLNQ96KR4 655 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 RPL10LQ96L21 214 aaKnown RBP11.89□□□□□ -0.51
CLN8-212ENST00000637083 NSMCE2Q96MF7 247 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 PRPF18Q99633 342 aaKnown RBP11.89□□□□□ -0.51
CLN8-212ENST00000637083 CORO1BQ9BR76 489 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 SLC46A2Q9BY10 475 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 DPY30Q9C005 99 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 SLC32A1Q9H598 525 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 ELOVL2Q9NXB9 296 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 PCDH10Q9P2E7 1040 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 CLEC4EQ9ULY5 219 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 MYRFQ9Y2G1 1151 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 IGLV3-16A0A075B6K0 115 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 ARHGAP10A1A4S6 786 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 CFAP99D6REC4 459 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 QSOX1O00391 747 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 HOXB6P17509 224 aaKnown RBP11.89□□□□□ -0.51
CLN8-212ENST00000637083 CALRP27797 417 aaKnown RBP11.89□□□□□ -0.51
CLN8-212ENST00000637083 IL12AP29459 219 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 GGT5P36269 586 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 GRIA2P42262 883 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 RPL38P63173 70 aaKnown RBP11.89□□□□□ -0.51
CLN8-212ENST00000637083 DYNC1I2Q13409 638 aaKnown RBP11.89□□□□□ -0.51
CLN8-212ENST00000637083 PHKG1Q16816 387 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 C18orf21Q32NC0 220 aaPredicted RBP11.89□□□□□ -0.51
CLN8-212ENST00000637083 HABP4Q5JVS0 413 aaKnown RBP11.89□□□□□ -0.51
CLN8-212ENST00000637083 PLEKHS1Q5SXH7 462 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 BRAT1Q6PJG6 821 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 TSPAN33Q86UF1 283 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 CGREF1Q99674 301 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 SLC29A1Q99808 456 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 BDH2Q9BUT1 245 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 ZDHHC6Q9H6R6 413 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 TBC1D14Q9P2M4 693 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 KLQ9UEF7 1012 aa11.89□□□□□ -0.51
CLN8-212ENST00000637083 ZNF490Q9ULM2 529 aaPredicted RBP11.89□□□□□ -0.51
CLN8-212ENST00000637083 TCRBV5S2A0A599 114 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 WASH3PC4AMC7 463 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 MANBAO00462 879 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 ANKRD28O15084 1053 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 BNIP3LO60238 219 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 PGM3O95394 542 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 H6PDO95479 791 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 LDLRP01130 860 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 CKMT2P17540 419 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 CYP2A7P20853 494 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 MAPK1P28482 360 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 HLA-FP30511 346 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 NNMTP40261 264 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 CCT8P50990 548 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 PTSQ03393 145 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 ATP6AP1Q15904 470 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 GGTA1PQ4G0N0 100 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 RFTN2Q52LD8 501 aaPredicted RBP11.88□□□□□ -0.51
CLN8-212ENST00000637083 GLYATQ6IB77 296 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 ELMSAN1Q6PJG2 1045 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 SLC2A7Q6PXP3 512 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 UBE2R2Q712K3 238 aaPredicted RBP11.88□□□□□ -0.51
CLN8-212ENST00000637083 ZSWIM9Q86XI8 627 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 LEMD2Q8NC56 503 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 HM13Q8TCT9 377 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 SLC13A3Q8WWT9 602 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 USP7Q93009 1102 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 TIFAQ96CG3 184 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 SLC12A9Q9BXP2 914 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 OSBPL6Q9BZF3 934 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 BRD9Q9H8M2 597 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 ACTR8Q9H981 624 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 PARVBQ9HBI1 364 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 LRTM1Q9HBL6 345 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 SLC24A3Q9HC58 644 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 CD320Q9NPF0 282 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 INTS7Q9NVH2 962 aaKnown RBP11.88□□□□□ -0.51
CLN8-212ENST00000637083 ARL15Q9NXU5 204 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 GMPR2Q9P2T1 348 aaKnown RBP11.88□□□□□ -0.51
CLN8-212ENST00000637083 SNX6Q9UNH7 406 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 SLC8A2Q9UPR5 921 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 CCL27Q9Y4X3 112 aa11.88□□□□□ -0.51
CLN8-212ENST00000637083 TRIM43BA6NCK2 446 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 SAC3D1A6NKF1 404 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms