RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 IMP4Q96G21 291 aaKnown RBP13.65□□□□□ -0.22
UBE3A-209ENST00000625778 DMRTB1Q96MA1 342 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 ROGDIQ9GZN7 287 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 SCUBE2Q9NQ36 999 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 SCN3BQ9NY72 215 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 PCDHB14Q9Y5E9 798 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 GMPPBQ9Y5P6 360 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 SLC22A1O15245 554 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 TLR5O60602 858 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 TMCC2O75069 709 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 VPS4BO75351 444 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 TBX18O95935 607 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 CHRNB1P11230 501 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 SMPD1P17405 629 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 EPHA2P29317 976 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 ERVPABLB-1P60509 514 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 MRPS15P82914 257 aaKnown RBP13.65□□□□□ -0.22
UBE3A-209ENST00000625778 NFKB2Q00653 900 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 CLCA4Q14CN2 919 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 SPANXN4Q5MJ08 99 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 NECAB2Q7Z6G3 386 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 PAF1Q8N7H5 531 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 OR4K2Q8NGD2 314 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 FUBP1Q96AE4 644 aaKnown RBP13.65□□□□□ -0.22
UBE3A-209ENST00000625778 AARSD1Q9BTE6 412 aaKnown RBP13.65□□□□□ -0.22
UBE3A-209ENST00000625778 APOL5Q9BWW9 433 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 KIF17Q9P2E2 1029 aa13.65□□□□□ -0.22
UBE3A-209ENST00000625778 EFCAB9A8MZ26 197 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 HHLA1C9JL84 531 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 DNTTP04053 509 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 HSMCR30P0CW71 290 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 PCMT1P22061 227 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 MADCAM1Q13477 382 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 TJAP1Q5JTD0 557 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 NEK10Q6ZWH5 1172 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 B3GNT8Q7Z7M8 397 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 ADHFE1Q8IWW8 467 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 ZBTB18Q99592 522 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 RNF167Q9H6Y7 350 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 IL37Q9NZH6 218 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 NEU3Q9UQ49 428 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 DNAJC25-GNG10A0A024R161 153 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 ELOVL7A1L3X0 281 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 MOXD2PA6NHM9 499 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 TEX28O15482 410 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 FGF10O15520 208 aaPredicted RBP13.64□□□□□ -0.23
UBE3A-209ENST00000625778 PAPSS2O95340 614 aaPredicted RBP13.64□□□□□ -0.23
UBE3A-209ENST00000625778 MMP3P08254 477 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 ITIH1P19827 911 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 MASP1P48740 699 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 LHX1P48742 406 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 PPP2R2BQ00005 443 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 EFEMP1Q12805 493 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 E2F2Q14209 437 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 TIGD5Q53EQ6 642 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 ZRANB3Q5FWF4 1079 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 UBXN11Q5T124 520 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.64□□□□□ -0.23
UBE3A-209ENST00000625778 RAP1GAP2Q684P5 730 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 BEND5Q7L4P6 421 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 CDC26Q8NHZ8 85 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 KIAA1191Q96A73 305 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 PGAP3Q96FM1 320 aaPredicted RBP13.64□□□□□ -0.23
UBE3A-209ENST00000625778 SPON2Q9BUD6 331 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 DCSTAMPQ9H295 470 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 TFB2MQ9H5Q4 396 aaKnown RBP13.64□□□□□ -0.23
UBE3A-209ENST00000625778 SYTL2Q9HCH5 934 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 SMPD4Q9NXE4 827 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 TRMT6Q9UJA5 497 aaKnown RBP13.64□□□□□ -0.23
UBE3A-209ENST00000625778 PCTPQ9UKL6 214 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 PCDHGA10Q9Y5H3 936 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 A0A1W2PQH9 124 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 GABRDO14764 452 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 GABARAPO95166 117 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 CYP11A1P05108 521 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 PRKACBP22694 351 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 ACVRL1P37023 503 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 GDF5P43026 501 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 TRAF3Q13114 568 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 SLC14A2Q15849 920 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 BCL2A1Q16548 175 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 DESI1Q6ICB0 168 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 DCP2Q8IU60 420 aaKnown RBP13.64□□□□□ -0.23
UBE3A-209ENST00000625778 ATG16L2Q8NAA4 619 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 ZNF641Q96N77 438 aaPredicted RBP13.64□□□□□ -0.23
UBE3A-209ENST00000625778 NMUR1Q9HB89 426 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 MIOSQ9NXC5 875 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 SNX8Q9Y5X2 465 aa13.64□□□□□ -0.23
UBE3A-209ENST00000625778 LRATO95237 230 aa13.63□□□□□ -0.23
UBE3A-209ENST00000625778 KRT8P05787 483 aa13.63□□□□□ -0.23
UBE3A-209ENST00000625778 ABRAXAS2Q15018 415 aa13.63□□□□□ -0.23
UBE3A-209ENST00000625778 CCDC58Q4VC31 144 aa13.63□□□□□ -0.23
UBE3A-209ENST00000625778 COQ5Q5HYK3 327 aa13.63□□□□□ -0.23
UBE3A-209ENST00000625778 STEAP3Q658P3 488 aa13.63□□□□□ -0.23
UBE3A-209ENST00000625778 SMYD5Q6GMV2 418 aa13.63□□□□□ -0.23
UBE3A-209ENST00000625778 LAIR1Q6GTX8 287 aa13.63□□□□□ -0.23
UBE3A-209ENST00000625778 SLC38A6Q8IZM9 456 aa13.63□□□□□ -0.23
UBE3A-209ENST00000625778 PGBD5Q8N414 524 aa13.63□□□□□ -0.23
UBE3A-209ENST00000625778 SLC13A3Q8WWT9 602 aa13.63□□□□□ -0.23
UBE3A-209ENST00000625778 FAM120BQ96EK7 910 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms