RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 SRPRAP08240 638 aaKnown RBP19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 HSPA14Q0VDF9 509 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 MED21Q13503 144 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 AP5B1Q2VPB7 878 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 PAGE3Q5JUK9 113 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 PLEKHS1Q5SXH7 462 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 IRAK1BP1Q5VVH5 260 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 UBE2R2Q712K3 238 aaPredicted RBP19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 ITFG1Q8TB96 612 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 ASB11Q8WXH4 323 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 SLCO4A1Q96BD0 722 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 LRIG1Q96JA1 1093 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 PARVBQ9HBI1 364 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 DLGAP2Q9P1A6 1054 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 NFKBIL1Q9UBC1 381 aaPredicted RBP19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 GRXCR2A6NFK2 248 aa19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 CFAP99D6REC4 459 aa19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 MPC1LP0DKB6 136 aa19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 G6PDP11413 515 aa19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 MYOGP15173 224 aa19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 DGKGP49619 791 aa19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 YBX1P67809 324 aaKnown RBP19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 BNIP2Q12982 314 aa19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 SMU1Q2TAY7 513 aa19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 RFTN2Q52LD8 501 aaPredicted RBP19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 ZNF805Q5CZA5 627 aa19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 CYP20A1Q6UW02 462 aa19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 Q6ZVL8 140 aa19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 APLFQ8IW19 511 aaPredicted RBP19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 OR2T34Q8NGX1 318 aa19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 OR2T3Q8NH03 318 aa19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 HCAR2Q8TDS4 363 aa19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 TMEM125Q96AQ2 219 aa19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 RAD18Q9NS91 495 aa19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 DUS2Q9NX74 493 aaKnown RBP19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 CHD7Q9P2D1 2997 aa19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 DKK3Q9UBP4 350 aa19.31■□□□□ 0.68
PCDHB11-202ENST00000624887 DPPA5A6NC42 116 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 LOC730098B7Z3J9 87 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 SLC28A1O00337 649 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 KPNA5O15131 536 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 RGS14O43566 566 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 NPPAP01160 153 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 ASLP04424 464 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 LYNP07948 512 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 ADH5P11766 374 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 CREB5Q02930 508 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 TIGD2Q4W5G0 525 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 HENMT1Q5T8I9 393 aaKnown RBP19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 TRIM46Q7Z4K8 759 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 TCAIMQ8N3R3 496 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 TRAM1L1Q8N609 369 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 KIAA1958Q8N8K9 716 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 WFIKKN2Q8TEU8 576 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 MTG2Q9H4K7 406 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 ACTL8Q9H568 366 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 SLC32A1Q9H598 525 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 RNF11Q9Y3C5 154 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 NUP210Q8TEM1 1887 aaPredicted RBP19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 ANKRD28O15084 1053 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 HOXC11O43248 304 aaPredicted RBP19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 RNASEH1O60930 286 aaKnown RBP19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 ULK1O75385 1050 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 AP2A2O94973 939 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 UBTFL6P0CB48 400 aaPredicted RBP19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 ATP6V1B2P21281 511 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 ETV3P41162 512 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 FOLH1Q04609 750 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 C9orf50Q5SZB4 431 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 SERPINA13PQ6UXR4 307 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 DPPA4Q7L190 304 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 VRK3Q8IV63 474 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 DDHD1Q8NEL9 900 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 OSCP1Q8WVF1 389 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 UHRF1Q96T88 793 aaPredicted RBP19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 SLC29A3Q9BZD2 475 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 KLQ9UEF7 1012 aa19.3■□□□□ 0.68
PCDHB11-202ENST00000624887 AQP12BA6NM10 295 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 GRXCR1A8MXD5 290 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 GFYI3L273 518 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 FFAR3O14843 346 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 SLC16A5O15375 505 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 GPR42O15529 346 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 SGTAO43765 313 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 MTX2O75431 263 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 EPORP19235 508 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 JAK1P23458 1154 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 GRIA3P42263 894 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 SP140Q13342 867 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 BOP1Q14137 746 aaKnown RBP19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 C11orf91Q3C1V1 193 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 CAPRIN2Q6IMN6 1127 aaKnown RBP19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 AQP12AQ8IXF9 295 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 DPP10Q8N608 796 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 DNAJB14Q8TBM8 379 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 USP7Q93009 1102 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 TIFAQ96CG3 184 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 ZSCAN5AQ9BUG6 496 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 EFHD1Q9BUP0 239 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 TRIM15Q9C019 465 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms