RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 PARP8Q8N3A8 854 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 CARNMT1Q8N4J0 409 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 MDGA1Q8NFP4 955 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 TP63Q9H3D4 680 aaPredicted RBP13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 IL37Q9NZH6 218 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 SCN5AQ14524 2016 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 A0A1W2PP18 115 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 AXIN1O15169 862 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 NOBOXO60393 691 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 CTPS1P17812 591 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 TTKP33981 857 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 ZXDBP98169 803 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 CLCQ05315 142 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 LAPTM5Q13571 262 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 SELPLGQ14242 412 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 SLC14A2Q15849 920 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 IRAK1BP1Q5VVH5 260 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 TXNDC8Q6A555 127 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 XAF1Q6GPH4 301 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 UGT3A1Q6NUS8 523 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 USP51Q70EK9 711 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 NATD1Q8N6N6 113 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 EGLN2Q96KS0 407 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 SMURF2Q9HAU4 748 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 NTN4Q9HB63 628 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 ARNT2Q9HBZ2 717 aa13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 FCF1Q9Y324 198 aaKnown RBP13.18□□□□□ -0.3
PCDHB17P-202ENST00000623466 LOC285095A0A1B0GVY8 99 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 FAM92AA1XBS5 289 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 MROH6A6NGR9 719 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 CCDC154A6NI56 674 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 STC2O76061 302 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 CYBBP04839 570 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 MBL2P11226 248 aaPredicted RBP13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 IL12AP29459 219 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 KANK2Q63ZY3 851 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 ZNF773Q6PK81 442 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 ANKS3Q6ZW76 656 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 RAB44Q7Z6P3 723 aaPredicted RBP13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 PIANPQ8IYJ0 282 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 TBC1D21Q8IYX1 336 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 TMBIM1Q969X1 311 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 CINPQ9BW66 212 aaPredicted RBP13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 RNF208Q9H0X6 261 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 ABCG8Q9H221 673 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 INTS10Q9NVR2 710 aaKnown RBP13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 DOCK4Q8N1I0 1966 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 XIRP2A4UGR9 3374 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 TBC1D4O60343 1298 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 WISP3O95389 354 aaPredicted RBP13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 FCGR1AP12314 374 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 ITGB6P18564 788 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 OPRL1P41146 370 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 TWF1Q12792 350 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 SPCS2Q15005 226 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 MEP1AQ16819 746 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 GLYATQ6IB77 296 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 PAQR3Q6TCH7 311 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 SFRP1Q8N474 314 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 TEX26Q8N6G2 289 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 FAM86B1Q8N7N1 296 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 CDKN2AIPNLQ96HQ2 116 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 MED30Q96HR3 178 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 CDK15Q96Q40 435 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 AGO1Q9UL18 857 aaKnown RBP13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 CASP8AP2Q9UKL3 1982 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 PATJQ8NI35 1801 aa13.17□□□□□ -0.3
PCDHB17P-202ENST00000623466 PTGES3LE9PB15 166 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 IGLV3-27P01718 113 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 RHOCP08134 193 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 ABCB1P08183 1280 aaPredicted RBP13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 FGF4P08620 206 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 ZNF37AP17032 561 aaPredicted RBP13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 IDUAP35475 653 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 ZFP36L2P47974 494 aaKnown RBP13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 PLA2G16P53816 162 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 ARSFP54793 590 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 AQP6Q13520 282 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 TSNQ15631 228 aaKnown RBP13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 HECTD3Q5T447 861 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 ARL14EPQ8N8R7 260 aaPredicted RBP13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 OR2T11Q8NH01 316 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 OR4L1Q8NH43 312 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 WFDC5Q8TCV5 224 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 BEGAINQ9BUH8 593 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 UBA2Q9UBT2 640 aaPredicted RBP13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 UTS2RQ9UKP6 389 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 CPQQ9Y646 472 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 CDC7O00311 574 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 CDK2AP1O14519 115 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 HMGA1P17096 107 aaKnown RBP13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 AGXTP21549 392 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 HNRNPFP52597 415 aaKnown RBP13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 NRG1Q02297 640 aaPredicted RBP13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 TLE2Q04725 743 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 ZNF177Q13360 481 aaPredicted RBP13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 DNASE1L3Q13609 305 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms