RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 GNAZP19086 355 aa16.02■□□□□ 0.15
LDB3-208ENST00000623007 KCNK10P57789 538 aa16.02■□□□□ 0.15
LDB3-208ENST00000623007 SEMG2Q02383 582 aa16.02■□□□□ 0.15
LDB3-208ENST00000623007 TRAF3Q13114 568 aa16.02■□□□□ 0.15
LDB3-208ENST00000623007 BOP1Q14137 746 aaKnown RBP16.02■□□□□ 0.15
LDB3-208ENST00000623007 PIGGQ5H8A4 983 aa16.02■□□□□ 0.15
LDB3-208ENST00000623007 LRRC73Q5JTD7 316 aa16.02■□□□□ 0.15
LDB3-208ENST00000623007 REP15Q6BDI9 236 aa16.02■□□□□ 0.15
LDB3-208ENST00000623007 RASGRP3Q8IV61 690 aa16.02■□□□□ 0.15
LDB3-208ENST00000623007 CDYL2Q8N8U2 506 aa16.02■□□□□ 0.15
LDB3-208ENST00000623007 LINC00615Q96LM1 132 aaPredicted RBP16.02■□□□□ 0.15
LDB3-208ENST00000623007 CCDC138Q96M89 665 aa16.02■□□□□ 0.15
LDB3-208ENST00000623007 CACNA2D2Q9NY47 1150 aa16.02■□□□□ 0.15
LDB3-208ENST00000623007 SNX6Q9UNH7 406 aa16.02■□□□□ 0.15
LDB3-208ENST00000623007 PDE10AQ9Y233 779 aa16.02■□□□□ 0.15
LDB3-208ENST00000623007 TNRC18O15417 2968 aaPredicted RBP16.01■□□□□ 0.15
LDB3-208ENST00000623007 FADS2P1A8MWK0 482 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 GPR89AB7ZAQ6 455 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 TRIM38O00635 465 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 PPP6CO00743 305 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 ULK1O75385 1050 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 PSIP1O75475 530 aaKnown RBP16.01■□□□□ 0.15
LDB3-208ENST00000623007 EPHX1P07099 455 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 GPR89BP0CG08 455 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 VHLP40337 213 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 GPR1P46091 355 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 TRAP1Q12931 704 aaKnown RBP16.01■□□□□ 0.15
LDB3-208ENST00000623007 LRP8Q14114 963 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 GRIN2CQ14957 1233 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 CMPK2Q5EBM0 449 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 SAMD4BQ5PRF9 694 aaKnown RBP16.01■□□□□ 0.15
LDB3-208ENST00000623007 C10orf62Q5T681 223 aaPredicted RBP16.01■□□□□ 0.15
LDB3-208ENST00000623007 LETMD1Q6P1Q0 360 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 IL27RAQ6UWB1 636 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 RFLNAQ6ZTI6 216 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 TRIM46Q7Z4K8 759 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 KLHDC8AQ8IYD2 350 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 OR52B6Q8NGF0 335 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 ARRDC3Q96B67 414 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 FBXL8Q96CD0 374 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 KCNA7Q96RP8 456 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 TMEM79Q9BSE2 394 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 TRIM39Q9HCM9 518 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 HEBP1Q9NRV9 189 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 ASIC5Q9NY37 505 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 SUCOQ9UBS9 1254 aaKnown RBP16.01■□□□□ 0.15
LDB3-208ENST00000623007 ZNF225Q9UK10 706 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 CROTQ9UKG9 612 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 TIMM22Q9Y584 194 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 GPR45Q9Y5Y3 372 aa16.01■□□□□ 0.15
LDB3-208ENST00000623007 C15orf38-AP3S2A0A0A6YYH1 394 aa16■□□□□ 0.15
LDB3-208ENST00000623007 SERTM1A2A2V5 107 aa16■□□□□ 0.15
LDB3-208ENST00000623007 OTOL1A6NHN0 477 aaPredicted RBP16■□□□□ 0.15
LDB3-208ENST00000623007 RECQL5O94762 991 aaPredicted RBP16■□□□□ 0.15
LDB3-208ENST00000623007 ALDOCP09972 364 aaKnown RBP16■□□□□ 0.15
LDB3-208ENST00000623007 C6P13671 934 aa16■□□□□ 0.15
LDB3-208ENST00000623007 ACPPP15309 386 aa16■□□□□ 0.15
LDB3-208ENST00000623007 C5AR1P21730 350 aa16■□□□□ 0.15
LDB3-208ENST00000623007 TEAD1P28347 426 aa16■□□□□ 0.15
LDB3-208ENST00000623007 BMP8BP34820 402 aa16■□□□□ 0.15
LDB3-208ENST00000623007 PSME3P61289 254 aa16■□□□□ 0.15
LDB3-208ENST00000623007 AGERQ15109 404 aa16■□□□□ 0.15
LDB3-208ENST00000623007 MAP7D1Q3KQU3 841 aa16■□□□□ 0.15
LDB3-208ENST00000623007 GK5Q6ZS86 529 aa16■□□□□ 0.15
LDB3-208ENST00000623007 ARPINQ7Z6K5 226 aa16■□□□□ 0.15
LDB3-208ENST00000623007 TMEM126BQ8IUX1 230 aa16■□□□□ 0.15
LDB3-208ENST00000623007 MYLIPQ8WY64 445 aa16■□□□□ 0.15
LDB3-208ENST00000623007 CCDC97Q96F63 343 aaPredicted RBP16■□□□□ 0.15
LDB3-208ENST00000623007 METTL2AQ96IZ6 378 aaKnown RBP16■□□□□ 0.15
LDB3-208ENST00000623007 MARK4Q96L34 752 aa16■□□□□ 0.15
LDB3-208ENST00000623007 CDRT15Q96T59 188 aa16■□□□□ 0.15
LDB3-208ENST00000623007 PRSS16Q9NQE7 514 aa16■□□□□ 0.15
LDB3-208ENST00000623007 EIF3LQ9Y262 564 aaKnown RBP16■□□□□ 0.15
LDB3-208ENST00000623007 BTRCQ9Y297 605 aa16■□□□□ 0.15
LDB3-208ENST00000623007 C15orf41Q9Y2V0 281 aa16■□□□□ 0.15
LDB3-208ENST00000623007 L3MBTL1Q9Y468 752 aa16■□□□□ 0.15
LDB3-208ENST00000623007 DNMT3AQ9Y6K1 912 aaPredicted RBP16■□□□□ 0.15
LDB3-208ENST00000623007 SLC5A10A0PJK1 596 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 SYNCRIPO60506 623 aaKnown RBP15.99■□□□□ 0.15
LDB3-208ENST00000623007 SLC22A3O75751 556 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 GDI1P31150 447 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 IL12RB1P42701 662 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 SLC6A12P48065 614 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 PNLIPRP1P54315 467 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 PCDH1Q08174 1060 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 SFSWAPQ12872 951 aaKnown RBP15.99■□□□□ 0.15
LDB3-208ENST00000623007 PRKG2Q13237 762 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 C6orf136Q5SQH8 315 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 BLOC1S3Q6QNY0 202 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 DET1Q7L5Y6 550 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 SLC22A15Q8IZD6 547 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 MINDY1Q8N5J2 469 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 ZNF366Q8N895 744 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 FNDC5Q8NAU1 212 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 GLB1L3Q8NCI6 653 aaPredicted RBP15.99■□□□□ 0.15
LDB3-208ENST00000623007 CSGALNACT1Q8TDX6 532 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 ASB9Q96DX5 294 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 CLPTM1LQ96KA5 538 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 MUC13Q9H3R2 512 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 DPEP2Q9H4A9 486 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms