RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 SIPA1Q96FS4 1042 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 AURKBQ96GD4 344 aaPredicted RBP10.32□□□□□ -0.76
VPS11-208ENST00000621676 TMEM74Q96NL1 305 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 ERVK-6Q9BXR3 956 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 FAM126AQ9BYI3 521 aaPredicted RBP10.32□□□□□ -0.76
VPS11-208ENST00000621676 SSU72Q9NP77 194 aaKnown RBP10.32□□□□□ -0.76
VPS11-208ENST00000621676 CD207Q9UJ71 328 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 SLC12A4Q9UP95 1085 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 ARHGEF17Q96PE2 2063 aaPredicted RBP10.32□□□□□ -0.76
VPS11-208ENST00000621676 SDHDO14521 159 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 C1QCP02747 245 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 ZNF8P17098 575 aaPredicted RBP10.32□□□□□ -0.76
VPS11-208ENST00000621676 IMPDH1P20839 514 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 VIPR1P32241 457 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 RASSF2P50749 326 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 CLCNKAP51800 687 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 UFM1P61960 85 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 PPP2CBP62714 309 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 PPP2CAP67775 309 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 TSSK4Q6SA08 328 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 ERN2Q76MJ5 926 aaKnown RBP10.32□□□□□ -0.76
VPS11-208ENST00000621676 ETFBKMTQ8IXQ9 262 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 NUS1Q96E22 293 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 SPATS2LQ9NUQ6 558 aaKnown RBP10.32□□□□□ -0.76
VPS11-208ENST00000621676 INTS7Q9NVH2 962 aaKnown RBP10.32□□□□□ -0.76
VPS11-208ENST00000621676 ZDHHC3Q9NYG2 299 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 PDE10AQ9Y233 779 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 ANKRD6Q9Y2G4 727 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 DHRS7Q9Y394 339 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 TPRP12270 2363 aaKnown RBP10.32□□□□□ -0.76
VPS11-208ENST00000621676 CFAP99D6REC4 459 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 H3BM21 787 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 CASC3O15234 703 aaKnown RBP10.32□□□□□ -0.76
VPS11-208ENST00000621676 PRNPP04156 253 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 COX4I1P13073 169 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 IL9P15248 144 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 OGNP20774 298 aaKnown RBP10.32□□□□□ -0.76
VPS11-208ENST00000621676 CTHP32929 405 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 KPNA2P52292 529 aaKnown RBP10.32□□□□□ -0.76
VPS11-208ENST00000621676 NAB1Q13506 487 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 GTF2H2Q13888 395 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 ZXDCQ2QGD7 858 aaPredicted RBP10.32□□□□□ -0.76
VPS11-208ENST00000621676 RFTN2Q52LD8 501 aaPredicted RBP10.32□□□□□ -0.76
VPS11-208ENST00000621676 CATSPEREQ5SY80 951 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 GTF2H2CQ6P1K8 395 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 TMPRSS11BQ86T26 416 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 KRTCAP2Q8N6L1 136 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 OR5AR1Q8NGP9 310 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 GLYATL1Q969I3 302 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 KIAA1191Q96A73 305 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 LMLNQ96KR4 655 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 PPM1MQ96MI6 270 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 SORBS1Q9BX66 1292 aaKnown RBP10.32□□□□□ -0.76
VPS11-208ENST00000621676 SEMA6AQ9H2E6 1030 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 THEGQ9P2T0 379 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 FBXL21Q9UKT6 434 aa10.32□□□□□ -0.76
VPS11-208ENST00000621676 TCRBV21S2A2A0A5A6 115 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 WASHC1A8K0Z3 465 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 ZNF195O14628 629 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 CCDC22O60826 627 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 DNTTP04053 509 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 NCK1P16333 377 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 DGKAP23743 735 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 PPARGP37231 505 aaPredicted RBP10.31□□□□□ -0.76
VPS11-208ENST00000621676 TBL3Q12788 808 aaKnown RBP10.31□□□□□ -0.76
VPS11-208ENST00000621676 RCN1Q15293 331 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 CDKN3Q16667 212 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 WSCD2Q2TBF2 565 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 SDE2Q6IQ49 451 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 SBSNQ6UWP8 590 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 TMEM92Q6UXU6 159 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 WASH2PQ6VEQ5 465 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 FAM83HQ6ZRV2 1179 aaPredicted RBP10.31□□□□□ -0.76
VPS11-208ENST00000621676 GOLGA7Q7Z5G4 137 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 APOLD1Q96LR9 279 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 RANBP9Q96S59 729 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 BTBD10Q9BSF8 475 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 MCMBPQ9BTE3 642 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 MTCH2Q9Y6C9 303 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 FEZF1A0PJY2 475 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 RTCAO00442 366 aaKnown RBP10.31□□□□□ -0.76
VPS11-208ENST00000621676 RNASEH1O60930 286 aaKnown RBP10.31□□□□□ -0.76
VPS11-208ENST00000621676 TGFB1P01137 390 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 NTRK1P04629 796 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 APOA4P06727 396 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 ALDOCP09972 364 aaKnown RBP10.31□□□□□ -0.76
VPS11-208ENST00000621676 CYP2A6P11509 494 aaPredicted RBP10.31□□□□□ -0.76
VPS11-208ENST00000621676 MYF5P13349 255 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 VCLP18206 1134 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 GNPDA1P46926 289 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 ADAM15Q13444 863 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 XKR6Q5GH73 641 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 BRAT1Q6PJG6 821 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 EPGNQ6UW88 154 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 GPRIN3Q6ZVF9 776 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 GALNT10Q86SR1 603 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 SPATA24Q86W54 205 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 NKAPQ8N5F7 415 aaKnown RBP10.31□□□□□ -0.76
VPS11-208ENST00000621676 OR2T11Q8NH01 316 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 CEP70Q8NHQ1 597 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms