RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 GPR83Q9NYM4 423 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 SEMA5BQ9P283 1151 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 ZNF711Q9Y462 761 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 DIDO1Q9BTC0 2240 aaKnown RBP7.64□□□□□ -1.19
CLK1-215ENST00000621181 ABCA12Q86UK0 2595 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 PIKFYVEQ9Y2I7 2098 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 DDX3YO15523 660 aaKnown RBP7.64□□□□□ -1.19
CLK1-215ENST00000621181 ZBTB11O95625 1053 aaPredicted RBP7.64□□□□□ -1.19
CLK1-215ENST00000621181 BPIP17213 487 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 RRADP55042 308 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 NAP1L1P55209 391 aaKnown RBP7.64□□□□□ -1.19
CLK1-215ENST00000621181 RAPSNQ13702 412 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 LAMB3Q13751 1172 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 PDK2Q15119 407 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 NR6A1Q15406 480 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 GPR19Q15760 415 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 UAP1Q16222 522 aaPredicted RBP7.64□□□□□ -1.19
CLK1-215ENST00000621181 ATP13A4Q4VNC1 1196 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 TMTC4Q5T4D3 741 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 ARMC6Q6NXE6 501 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 LRIG3Q6UXM1 1119 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 CERS6Q6ZMG9 384 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 ZNF517Q6ZMY9 492 aaPredicted RBP7.64□□□□□ -1.19
CLK1-215ENST00000621181 C11orf96Q7Z7L8 435 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 AMZ2Q86W34 360 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 OOSP2Q86WS3 158 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 HPS6Q86YV9 775 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 D2HGDHQ8N465 521 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 GOLGA6L1Q8N7Z2 621 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 ENDOVQ8N8Q3 282 aaKnown RBP7.64□□□□□ -1.19
CLK1-215ENST00000621181 TMEM102Q8N9M5 508 aaPredicted RBP7.64□□□□□ -1.19
CLK1-215ENST00000621181 GPR150Q8NGU9 434 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 OR8K5Q8NH50 307 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 CPT1BQ92523 772 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 PNPLA2Q96AD5 504 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 C5orf34Q96MH7 638 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 CD180Q99467 661 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 NUDT9Q9BW91 350 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 TXLNGYQ9BZA5 131 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 ZCCHC2Q9C0B9 1178 aaKnown RBP7.64□□□□□ -1.19
CLK1-215ENST00000621181 CHST8Q9H2A9 424 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 FANCEQ9HB96 536 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 IMP3Q9NV31 184 aaKnown RBP7.64□□□□□ -1.19
CLK1-215ENST00000621181 HRASLS2Q9NWW9 162 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 SOHLH2Q9NX45 425 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 NFKBIL1Q9UBC1 381 aaPredicted RBP7.64□□□□□ -1.19
CLK1-215ENST00000621181 ERRFI1Q9UJM3 462 aaPredicted RBP7.64□□□□□ -1.19
CLK1-215ENST00000621181 TCFL5Q9UL49 500 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 PSMD13Q9UNM6 376 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 OR5K3A6NET4 321 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 MEN1O00255 615 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 CEACAM4O75871 244 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 LDLRP01130 860 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 ARSEP51690 589 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 HADHBP55084 474 aaKnown RBP7.63□□□□□ -1.19
CLK1-215ENST00000621181 AP1B1Q10567 949 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 SLC10A2Q12908 348 aaPredicted RBP7.63□□□□□ -1.19
CLK1-215ENST00000621181 ZBTB17Q13105 803 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 XRCC4Q13426 336 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 CUL1Q13616 776 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 KYNUQ16719 465 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 TUBB8Q3ZCM7 444 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 ATP13A5Q4VNC0 1218 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 ZRANB3Q5FWF4 1079 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 FAM69BQ5VUD6 431 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 MED25Q71SY5 747 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 RBMXL3Q8N7X1 1067 aaKnown RBP7.63□□□□□ -1.19
CLK1-215ENST00000621181 CNTD1Q8N815 330 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 SLC38A9Q8NBW4 561 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 BRSK1Q8TDC3 778 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 ADAMTS17Q8TE56 1095 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 SNRNP40Q96DI7 357 aaKnown RBP7.63□□□□□ -1.19
CLK1-215ENST00000621181 CLIP3Q96DZ5 547 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 C19orf60Q96EN9 201 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 TCTN2Q96GX1 697 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 AGAP3Q96P47 875 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 VPS35Q96QK1 796 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 CAPS2Q9BXY5 557 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 NLNQ9BYT8 704 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 CEP41Q9BYV8 373 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 SLC7A5P2Q9GIP4 190 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 BPIFA1Q9NP55 256 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 RSPH14Q9UHP6 348 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 SLC5A6Q9Y289 635 aa7.63□□□□□ -1.19
CLK1-215ENST00000621181 CFAP20Q9Y6A4 193 aaKnown RBP7.63□□□□□ -1.19
CLK1-215ENST00000621181 MDC1Q14676 2089 aaKnown RBP7.62□□□□□ -1.19
CLK1-215ENST00000621181 WIPF3A6NGB9 483 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 OR2AG2A6NM03 316 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 CCDC188H7C350 402 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 PGRMC1O00264 195 aaKnown RBP7.62□□□□□ -1.19
CLK1-215ENST00000621181 KCNJ13O60928 360 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 KRT14P02533 472 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 TMEM253P0C7T8 217 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 PBLDP30039 288 aaPredicted RBP7.62□□□□□ -1.19
CLK1-215ENST00000621181 CDK18Q07002 472 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 PPIDQ08752 370 aaKnown RBP7.62□□□□□ -1.19
CLK1-215ENST00000621181 ELOAQ14241 798 aaKnown RBP7.62□□□□□ -1.19
CLK1-215ENST00000621181 NFE2L1Q14494 772 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 RPE65Q16518 533 aa7.62□□□□□ -1.19
CLK1-215ENST00000621181 DNAJC21Q5F1R6 531 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms