RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 EPN2O95208 641 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 FTH1P02794 183 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 SMIM18P0DKX4 95 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 COL6A2P12110 1019 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 RHOQP17081 205 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 FUT4P22083 530 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 FSHRP23945 695 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 RPL4P36578 427 aaKnown RBP8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 MAPK8P45983 427 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 RPIAP49247 311 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 SLC7A2P52569 658 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 MANFP55145 182 aaKnown RBP8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 C1QTNF8P60827 252 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 MYBPC1Q00872 1141 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 SULT2A1Q06520 285 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 C1orf61Q13536 156 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 LPIN1Q14693 890 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 TSTD2Q5T7W7 516 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 REP15Q6BDI9 236 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 POTEHQ6S545 545 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 B3GNT6Q6ZMB0 384 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 FAM43BQ6ZT52 329 aaPredicted RBP8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 EPHX4Q8IUS5 362 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 ADGRG2Q8IZP9 1017 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 CLYBLQ8N0X4 340 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 TMEM132CQ8N3T6 1108 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 TSTD1Q8NFU3 115 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 MAGEE2Q8TD90 523 aaPredicted RBP8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 RAD51AP1Q96B01 352 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 EBPLQ9BY08 206 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 ELL3Q9HB65 397 aaPredicted RBP8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 TDP1Q9NUW8 608 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 A0A1B0GTW7 788 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 RBM47A0AV96 593 aaKnown RBP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 GRXCR1A8MXD5 290 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 GABRDO14764 452 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 TPST2O60704 377 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 TIPRLO75663 272 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 IPO13O94829 963 aaKnown RBP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 F2P00734 622 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 GNRH1P01148 92 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 CKMT2P17540 419 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 NTSP30990 170 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 S100A5P33763 92 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 SEPHS1P49903 392 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 PGDP52209 483 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 HK2P52789 917 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 TRIM25Q14258 630 aaKnown RBP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 TSNQ15631 228 aaKnown RBP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 MLIPQ5VWP3 458 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 RNF19BQ6ZMZ0 732 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 CPSF7Q8N684 471 aaKnown RBP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 ITFG1Q8TB96 612 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 JPH3Q8WXH2 748 aaPredicted RBP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 GLMNQ92990 594 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 ZFRQ96KR1 1074 aaKnown RBP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 PHF12Q96QT6 1004 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 HEPHQ9BQS7 1158 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 MRPS26Q9BYN8 205 aaKnown RBP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 FBXL12Q9NXK8 326 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 DUSP12Q9UNI6 340 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 KCNK6Q9Y257 313 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 TRIP12Q14669 1992 aaPredicted RBP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 A0A087X1B8 175 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 A8MT66 165 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 OR1F1O43749 312 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 CA3P07451 260 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 SNRPB2P08579 225 aaKnown RBP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 CCNCP24863 283 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 AKT2P31751 481 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 HSPA13P48723 471 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 MTAPQ13126 283 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 MYLK3Q32MK0 819 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 SERPINA9Q86WD7 417 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 GHDCQ8N2G8 530 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 METTL25Q8N6Q8 603 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 SNRNP27Q8WVK2 155 aaKnown RBP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 EZH1Q92800 747 aaPredicted RBP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 DNAJA3Q96EY1 480 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 C12orf66Q96MD2 445 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 PRICKLE1Q96MT3 831 aaPredicted RBP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 FCRL5Q96RD9 977 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 OLFM1Q99784 485 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 SPAG4Q9NPE6 437 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 MIOSQ9NXC5 875 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 HCSTQ9UBK5 93 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 GIMAP2Q9UG22 337 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 POLR3HQ9Y535 204 aaPredicted RBP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 KCTD3Q9Y597 815 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 HNRNPRO43390 633 aaKnown RBP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 NPHS1O60500 1241 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 MMP20O60882 483 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 GJB5O95377 273 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 PABPC1P11940 636 aaKnown RBP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 ZNF37AP17032 561 aaPredicted RBP8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 ARNTP27540 789 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 GNPDA1P46926 289 aa8.14□□□□□ -1.11
PTPDC1-204ENST00000620992 MRPS15P82914 257 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms