RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 XRCC1P18887 633 aaPredicted RBP15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 ATP5DP30049 168 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 SERPINB8P50452 374 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 BIRC2Q13490 618 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 KRT33BQ14525 404 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 CASP8Q14790 479 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 NR0B2Q15466 257 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 PROX2Q3B8N5 592 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 PPM1JQ5JR12 505 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 DUS1LQ6P1R4 473 aaKnown RBP15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 PIWIL4Q7Z3Z4 852 aaKnown RBP15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 SLC9B2Q86UD5 537 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 C17orf82Q86X59 251 aaPredicted RBP15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 TRIM48Q8IWZ4 208 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 CYP4X1Q8N118 509 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 NETO1Q8TDF5 533 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 CXorf40BQ96DE9 158 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 MTBPQ96DY7 904 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 FAM122AQ96E09 287 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 LINGO1Q96FE5 620 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 ZIM3Q96PE6 472 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 FERD3LQ96RJ6 166 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 TMEM109Q9BVC6 243 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 CPNE7Q9UBL6 633 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 TLK1Q9UKI8 766 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 PADI4Q9UM07 663 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 RUVBL2Q9Y230 463 aaKnown RBP15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 ASF1AQ9Y294 204 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 BPTFQ12830 3046 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 LY6G6EA0A0G2JKS1 128 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 EIF3FO00303 357 aaPredicted RBP15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 CDH16O75309 829 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 WISP3O95389 354 aaPredicted RBP15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 TSPAN12O95859 305 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 ALDOAP04075 364 aaKnown RBP15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 C2P06681 752 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 ZNF37AP17032 561 aaPredicted RBP15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 GMPRP36959 345 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 RPIAP49247 311 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 UBE2IP63279 158 aaKnown RBP15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 DAB2P98082 770 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 ZNF844Q08AG5 666 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 DNAJC3Q13217 504 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 RASA2Q15283 850 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 LRIG3Q6UXM1 1119 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 TIFABQ6ZNK6 161 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 NEK10Q6ZWH5 1172 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 SPATA6LQ8N4H0 392 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 NKAPQ8N5F7 415 aaKnown RBP15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 ANKRD49Q8WVL7 239 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 CNDP2Q96KP4 475 aaKnown RBP15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 FOPNLQ96NB1 174 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 EURLQ9NYK6 297 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 FTSJ1Q9UET6 329 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 HEBP2Q9Y5Z4 205 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 U3KQA8 63 aa15.24■□□□□ 0.03
PCDHGC3-204ENST00000617222 ASCC3Q8N3C0 2202 aaKnown RBP15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 ARID1BQ8NFD5 2236 aaPredicted RBP15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 A0A096LPK6 155 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 CPED1A4D0V7 1026 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 FOXO6A8MYZ6 492 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 PPM1DO15297 605 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 CBFA2T3O75081 653 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 MATN4O95460 622 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 SLC35E2BP0CK96 405 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 CCDC166P0CW27 439 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 CSRP3P50461 194 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 HHEXQ03014 270 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 PRKG2Q13237 762 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 KRT71Q3SY84 523 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 CEP85LQ5SZL2 805 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 LRRC8EQ6NSJ5 796 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 PIP4P1Q86T03 277 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 ALYREFQ86V81 257 aaKnown RBP15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 MYO1HQ8N1T3 1032 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 RIBC1Q8N443 379 aaPredicted RBP15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 OR5AR1Q8NGP9 310 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 MZB1Q8WU39 189 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 ISL2Q96A47 359 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 PDLIM5Q96HC4 596 aaKnown RBP15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 UNKQ9C0B0 810 aaKnown RBP15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 VPS11Q9H270 941 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 STN1Q9H668 368 aaKnown RBP15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 MVB12BQ9H7P6 319 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 NCKIPSDQ9NZQ3 722 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 LRIT1Q9P2V4 623 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 ACOT9Q9Y305 439 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 RNF215Q9Y6U7 377 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 COLEC10Q9Y6Z7 277 aa15.23■□□□□ 0.03
PCDHGC3-204ENST00000617222 ARHGEF17Q96PE2 2063 aaPredicted RBP15.22■□□□□ 0.03
PCDHGC3-204ENST00000617222 A0A087X1B8 175 aa15.22■□□□□ 0.03
PCDHGC3-204ENST00000617222 A0A1W2PPM1 405 aa15.22■□□□□ 0.03
PCDHGC3-204ENST00000617222 RHPN2P1A8MT19 583 aa15.22■□□□□ 0.03
PCDHGC3-204ENST00000617222 RFPL1O75677 317 aa15.22■□□□□ 0.03
PCDHGC3-204ENST00000617222 MT-ND3P03897 115 aa15.22■□□□□ 0.03
PCDHGC3-204ENST00000617222 MPOP05164 745 aa15.22■□□□□ 0.03
PCDHGC3-204ENST00000617222 CKMT1AP12532 417 aa15.22■□□□□ 0.03
PCDHGC3-204ENST00000617222 KRT15P19012 456 aa15.22■□□□□ 0.03
PCDHGC3-204ENST00000617222 NDUFS1P28331 727 aa15.22■□□□□ 0.03
PCDHGC3-204ENST00000617222 MAGEA12P43365 314 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms