RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 IQCCQ4KMZ1 466 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 LRIF1Q5T3J3 769 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 WDR26Q9H7D7 661 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 GPR160Q9UJ42 338 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 RAC2P15153 192 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 RAB4BP61018 213 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 AIMP2Q13155 320 aaKnown RBP12.46□□□□□ -0.41
TCF4-248ENST00000616053 SCGB2B2Q4G0G5 96 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 GCNT6Q5T4J0 391 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 NLGN4YQ8NFZ3 816 aaPredicted RBP12.46□□□□□ -0.41
TCF4-248ENST00000616053 TUBGCP5Q96RT8 1024 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 KCNIP1Q9NZI2 227 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 ADGRL3Q9HAR2 1447 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 RAD51DO75771 328 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 PNMA6AP0CW24 399 aaPredicted RBP12.46□□□□□ -0.41
TCF4-248ENST00000616053 ARP10275 920 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 SLC2A1P11166 492 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 NDUFS1P28331 727 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 MAN2A2P49641 1150 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 TNK2Q07912 1038 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 TIGD5Q53EQ6 642 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 SLC39A4Q6P5W5 647 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 JAGN1Q8N5M9 183 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 OR4L1Q8NH43 312 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 SP140LQ9H930 580 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 TMLHEQ9NVH6 421 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 MGAT4CQ9UBM8 478 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 AP2A2O94973 939 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 NR4A1P22736 598 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 AP2S1P53680 142 aaPredicted RBP12.46□□□□□ -0.41
TCF4-248ENST00000616053 ASB18Q6ZVZ8 466 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 SLC47A1Q96FL8 570 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 CCDC59Q9P031 241 aaKnown RBP12.46□□□□□ -0.41
TCF4-248ENST00000616053 NCANO14594 1321 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 SSX5O60225 188 aa12.46□□□□□ -0.42
TCF4-248ENST00000616053 IPO13O94829 963 aaKnown RBP12.46□□□□□ -0.42
TCF4-248ENST00000616053 C8AP07357 584 aa12.46□□□□□ -0.42
TCF4-248ENST00000616053 PDGFRLQ15198 375 aa12.46□□□□□ -0.42
TCF4-248ENST00000616053 STK11Q15831 433 aa12.46□□□□□ -0.42
TCF4-248ENST00000616053 IQCHQ86VS3 1027 aa12.46□□□□□ -0.42
TCF4-248ENST00000616053 ARHGAP12Q8IWW6 846 aa12.46□□□□□ -0.42
TCF4-248ENST00000616053 SH2D3CQ8N5H7 860 aa12.46□□□□□ -0.42
TCF4-248ENST00000616053 C1orf50Q9BV19 199 aa12.46□□□□□ -0.42
TCF4-248ENST00000616053 B4GALT2O60909 372 aa12.46□□□□□ -0.42
TCF4-248ENST00000616053 HOXB2P14652 356 aa12.46□□□□□ -0.42
TCF4-248ENST00000616053 DECR1Q16698 335 aa12.46□□□□□ -0.42
TCF4-248ENST00000616053 GPT2Q8TD30 523 aa12.46□□□□□ -0.42
TCF4-248ENST00000616053 LHX5Q9H2C1 402 aa12.46□□□□□ -0.42
TCF4-248ENST00000616053 TAS2R1Q9NYW7 299 aa12.46□□□□□ -0.42
TCF4-248ENST00000616053 EVLQ9UI08 416 aaPredicted RBP12.46□□□□□ -0.42
TCF4-248ENST00000616053 MAPTP10636 758 aaKnown RBP12.46□□□□□ -0.42
TCF4-248ENST00000616053 SPAM1P38567 509 aa12.46□□□□□ -0.42
TCF4-248ENST00000616053 BCL2A1Q16548 175 aa12.46□□□□□ -0.42
TCF4-248ENST00000616053 KLHDC7AQ5VTJ3 777 aa12.46□□□□□ -0.42
TCF4-248ENST00000616053 RAB9BQ9NP90 201 aa12.46□□□□□ -0.42
TCF4-248ENST00000616053 ZNF224Q9NZL3 707 aa12.46□□□□□ -0.42
TCF4-248ENST00000616053 SSU72P8A0A1W2PR75 194 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 ARGFXA6NJG6 315 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 CDC7O00311 574 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 ABRAXAS2Q15018 415 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 LINC00116Q8NCU8 138 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 KREMEN2Q8NCW0 462 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 TRIM43Q96BQ3 446 aaPredicted RBP12.45□□□□□ -0.42
TCF4-248ENST00000616053 TPK1Q9H3S4 243 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 SHANK2Q9UPX8 1470 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 RAD51CO43502 376 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 KRT36O76013 467 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 CNOT4O95628 575 aaKnown RBP12.45□□□□□ -0.42
TCF4-248ENST00000616053 CLCN5P51795 746 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 VGLL4Q14135 290 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 HEPACAMQ14CZ8 416 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 RAET1LQ5VY80 246 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 AMZ2Q86W34 360 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 NANOS1Q8WY41 292 aaKnown RBP12.45□□□□□ -0.42
TCF4-248ENST00000616053 POLR3HQ9Y535 204 aaPredicted RBP12.45□□□□□ -0.42
TCF4-248ENST00000616053 CRB1P82279 1406 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 CRYZL1O95825 349 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 GSTM2P28161 218 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 CASP5P51878 434 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 OR12D2P58182 307 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 BLMHQ13867 455 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 TATDN1Q6P1N9 297 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 TMEM220Q6QAJ8 160 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 KLHDC7BQ96G42 594 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 ZFRQ96KR1 1074 aaKnown RBP12.45□□□□□ -0.42
TCF4-248ENST00000616053 STOX2Q9P2F5 926 aaPredicted RBP12.45□□□□□ -0.42
TCF4-248ENST00000616053 ZNF490Q9ULM2 529 aaPredicted RBP12.45□□□□□ -0.42
TCF4-248ENST00000616053 A0A1B0GVI7 797 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 MFSD11O43934 449 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 HSD17B7P56937 341 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 C9orf152Q5JTZ5 239 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 SWT1Q5T5J6 900 aaKnown RBP12.45□□□□□ -0.42
TCF4-248ENST00000616053 MAPK15Q8TD08 544 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 ALPK1Q96QP1 1244 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 FARSBQ9NSD9 589 aaKnown RBP12.45□□□□□ -0.42
TCF4-248ENST00000616053 UGGT1Q9NYU2 1555 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 OR6C6A6NF89 314 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 ACKR2O00590 384 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 CLDN11O75508 207 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 ADRA1DP25100 572 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms